CB293848

Overview
NameCB293848
Unique NameCB293848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig335 contig Csv1_Contig335:1..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_GEOSW (2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70) GN=menE PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31
Identity = 64/152 (42.11%), Postives = 101/152 (66.45%), Query Frame = -2
Query:  293 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 748
            GEIV +G ++  GYL  P+ T K ++  GWFYTGD+G I  DG+L + DR  D+IISGGEN+   E+E+VL ++ AV EA V    DE WG+ PCAF  +K +     T +++ ++C+A L +Y +PK + F +ELP+ ++ K+ + +L+++
Sbjct:  335 GEIVVKGPNVTKGYLHRPDATAKAIRG-GWFYTGDIGYIDEDGFLYVLDRRSDLIISGGENVYPAEIEAVLLSHEAVEEAGVTGIDDETWGQVPCAF--VKRKRGYSVTVEQLKQFCQAHLAKYKIPKQIYFVDELPRNASQKLLRHQLKQL 483          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 66/156 (42.31%), Postives = 102/156 (65.38%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++PAV EA VV   D+ WG+ P AF+    E+    TE+EII +C A+L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  331 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFVVKSGEV----TEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = -2
Query:  296 PEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 811
            P  +V   E G          GE+  RG  +M GY KD + TRK +  DGW +TGD+ V+  DGY  I  R KD++I GGEN+   E+E  LY +PAV +  VV  PD  +GE   A++ LK    K  +  E+  YC+ ++ R+ +P+ V+F ++ P T++GKI+K++LRE
Sbjct:  368 PHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKFGEEAAAWIKLKD--GKSVSPDELKAYCKGKIARHKIPRYVIFTDDYPMTASGKIQKYKLRE 537          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++PAV EA VV   D+ WG+ P AF+    E+    TE+EII +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  331 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKSGEV----TEEEIIHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30
Identity = 64/156 (41.03%), Postives = 101/156 (64.74%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++PAV EA VV   D+ WG+ P AF+    E+    TE+EI+ +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  331 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKSGEV----TEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACCN (2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30
Identity = 64/152 (42.11%), Postives = 99/152 (65.13%), Query Frame = -2
Query:  293 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 748
            GEIV +G ++  GY K  + TR+ + D GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++P V EA VV + DE WG+ P AF+    ++    TE+E+I +C  +L +Y VPK V F  ELP+ ++ K+ + ELR++
Sbjct:  331 GEIVVKGPNVTRGYFKREDATRETIVD-GWLHTGDLGYVDDEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPLVLEAGVVGKSDETWGQVPVAFVVKAGQV----TEEEMIHFCEEKLAKYKVPKAVYFLHELPRNASKKLLRRELRQL 477          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30
Identity = 64/156 (41.03%), Postives = 100/156 (64.10%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + T + +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++PAV EA VV   DE WG+ P AF+    ++    TE+EII +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  331 GEIVVKGPNVTGGYFNREDATHEAIRN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQVPAAFVVKSGDV----TEEEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRKLVEEM 481          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29
Identity = 63/156 (40.38%), Postives = 100/156 (64.10%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++P V EA VV   D+ WG+ P AF+    E+    TE+EI+ +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGEI----TEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 482          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29
Identity = 63/156 (40.38%), Postives = 100/156 (64.10%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++P V EA VV   D+ WG+ P AF+    E+    TE+EI+ +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  331 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGEI----TEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 481          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29
Identity = 63/156 (40.38%), Postives = 100/156 (64.10%), Query Frame = -2
Query:  281 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAM 748
            GEIV +G ++  GY    + TR+ +++ GW +TGD+G +  +G+L + DR  D+IISGGEN+   ++E VL ++P V EA VV   D+ WG+ P AF+    E+    TE+EI+ +C  +L +Y VPK   F EELP+ ++ K+ + ELR++ + M
Sbjct:  332 GEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGEI----TEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM 482          
The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 334
Match NameE-valueIdentityDescription
MENE_GEOSW3.720e-3142.112-succinylbenzoate--CoA ligase OS=Geobacillus sp. ... [more]
MENE_BACC16.345e-3142.312-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
YNGI_BACSU1.414e-3039.53Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
MENE_BACC73.149e-3041.672-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ5.372e-3041.032-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCN7.015e-3042.112-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACWK9.162e-3041.032-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_BACC01.563e-2940.382-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN1.563e-2940.382-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAH1.563e-2940.382-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06dc03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06dc03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bp
TTTTTTTTTTTTTTTTTAATATAAATTTTTTGTACTATTTAACTTAAATT
CAATGGTCTACACATTACTAATGCAGTAAAAAGACAAAAAAAATTACAGC
CCCATGAAAGAGGAACCTATGCTCCAAGTTGTGTAAGTGAAAAACAAGAA
TGGGACATAACAAATCATATGCGCAAATCAAACTTCATACCAAACATACC
GACACATGACGTAGGCCCAAATTATTATCACATCCCGAGTCAAATCGGTA
GCTCTACATCCGACTCACTTTCGATTTGCCCATCGCCTTCGCCATCTCTC
TTAATTCAAACTTCTTAATCTTCCCCGTCGAAGTCTTCGGCAACTCCTCC
TTGAACACCACCGTTTTAGGCACCATGTAACGCGGCAACCTCGCTCTACA
GTACTCAATAATCTCCTTCTCAGTTGGTTTCTTTTCCAATTCAGCCTTCA
AGCTCAAAAACGCACACGGGGTCTCCCCCCAAAACTCATCAGGCCGAGCC
ACGACAGCCGCCTCGTTAACGGCCGGATTCGTGTACAGCACCGATTCAAC
CTCCACGCTGCTCAAATTCTCTCCCCCGCTTATTATCACATCCTTTGATC
GATCTTTAATCTCTAAATAACCGTCCGCGTGAATCACGCCAACGTCTCCC
GTGTAAAACCAACCATCATCCTTCATGCACTTGCGGGTCCCGTTAGGGTC
TTTGAGATAACCAAGCATCATGCTTCCGCCTCTGAACACGATTTCACCGA
GCGATGCCCCGTCGTGACTCACACTGAGTCCTGACTCGGAATCTATAACG
TCTATTTCGGGGAAGCAAACCGTCCTCACTCCTTGTCTCGATTTCATCCT
CGCCCTCTCCGTCGCCGGGAACCTATTCCACTTATTT
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