CB293903

Overview
NameCB293903
Unique NameCB293903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1026..1707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.321e-97
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = -2
Query:  176 TYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 682
            TYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  326 TYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.940e-73
Identity = 126/168 (75.00%), Postives = 147/168 (87.50%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  317 YLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.065e-71
Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  327 YMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.458e-69
Identity = 123/172 (71.51%), Postives = 144/172 (83.72%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENS----LRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            YLGTNPANDN +FVDE      LR  S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  322 YLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.544e-67
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  312 FMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.299e-40
Identity = 79/168 (47.02%), Postives = 109/168 (64.88%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            + G +PA+ N+   +   L    + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  331 FQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.096e-39
Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            Y G +PA  N+       L    + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  329 YQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37
Identity = 76/168 (45.24%), Postives = 106/168 (63.10%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            Y G +PA  N+       L+   + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  327 YHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = -2
Query:  176 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 679
            Y G +PA  N+   + N L    + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  309 YHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB293903 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36
Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = -2
Query:  227 YLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 679
            Y G +PA  N   ++E  ++     VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  320 YQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB293903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI7.321e-97100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU1.940e-7375.00Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH1.065e-7170.83Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA6.458e-6971.51Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH3.544e-6769.64Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO6.299e-4047.02Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN9.096e-3945.83Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.715e-3745.24Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN4.991e-3745.24Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH1.112e-3650.33Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_06de12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293903 ID=CB293903; Name=CB293903; organism=Citrus sinensis; type=EST; length=683bp
TAAATATAATAATTACAAGGAAGCAATCACCAAGCCAAATGAAAATAAAC
TTTGCCATAAATGGAAGCAATCATCAACCAAATGAAAATATATATTGCCA
TATTGGCGACTATAATGAAAACTAACATATTTCAAGAACTGGCTTATGAT
ATTCGCACAGTTCTCGGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAA
CTCCAAGGACCAGAAGGAATATTTTCACAGGCTTGTGCTGATGCTTCCGC
CATCTTCTCTTTCCCAATTCCTGTATTACAGATGTTTGCAAGAGAACGCA
TGTGCTTCATTCCATATTGCGATAGAGCTCCACAGTGCGACTCAAAAGTC
CTCACCAGTGATTTGAGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGC
AGGTCGAACAGTGTTCAAGATCTCTGGACCTTTCTCAATTCCAAATAAGA
GCTTTCCAATAAGTTTGATGCTGTGGTCTACATGCATTCTATGAGACATT
GCTTCAAAAAACTGCTTCTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGG
TGCCTTGCGGTACTTGTCCCAGAAATGCAAGAGATCGGCATCTCGCTGGT
TAACAGCTTTAGATGCTGGCCTTAAGGAGTTCTCATCCACAAAAGTGTAG
TTATCATTTGCAGGATTTGTACCCAAGTACGTG
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