CB293921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.539e-84 Identity = 144/164 (87.80%), Postives = 156/164 (95.12%), Query Frame = -2 Query: 197 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMVEGAPLETVTPIPYDVVNDFKGGY 688 MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHV SRC+EEFKLRKK+ND LKAD KARGE ISTKRQPKGPKPGFMVEG LETVTPIPYDVVND KGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 2.625e-84 Identity = 144/164 (87.80%), Postives = 155/164 (94.51%), Query Frame = -2 Query: 197 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMVEGAPLETVTPIPYDVVNDFKGGY 688 MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHV SRC+EEFKLRKKKNDELKA KA GE ISTKRQPKGPKPGFMVEG LETVTPIPYDVVND KGGY Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.008e-43 Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = -2 Query: 224 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVK-ARGEVISTKRQPKGPKPGFMV--EGAPLETVTPIPYD 688 MP +G R+RTR LFAR F+ G + LSTYL +KIG+YVDV N AVHKGMP K+YHGRTG VWNVTKRA+GVEINK+V +RIIKKRIHVR++HV S C + F R K+ND++K D A+ V STKR P PK G ++ +G ET IPY+ Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae GN=RPL21A PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.246e-42 Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = -2 Query: 224 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMV--EGAPLETVTPIPYD 688 M HG RSRTR +F R FRK G + LSTYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH+ S+C +EF R K N +A+ KA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae GN=RPL21B PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42 Identity = 81/157 (51.59%), Postives = 111/157 (70.70%), Query Frame = -2 Query: 224 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMV--EGAPLETVTPIPYD 688 M HG RSRTR +F R FRK G + +STYL+ YK+GD VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH+ S+C +EF R K N +A+ KA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.611e-41 Identity = 83/159 (52.20%), Postives = 106/159 (66.67%), Query Frame = -2 Query: 218 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMVEGAPLE--TVTPIPYDVV 688 MP GLR+RTR LF+R FR G + +T+LRT+++GDYVD+K G VHKGMPHKFYHGRTGRVWNVT RA+GV INK+VG RII K+IHVR EHV PS R ++N + + K G+ + +R P PK GF V E V P+ Y+++ Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe GN=rpl21b PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.781e-40 Identity = 81/157 (51.59%), Postives = 110/157 (70.06%), Query Frame = -2 Query: 224 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMVEGAPLETVT--PIPYD 688 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV S+C ++F R K N+ + + KA+G+ + +RQP P V E VT P+ YD Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe GN=rpl21a PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.781e-40 Identity = 81/157 (51.59%), Postives = 110/157 (70.06%), Query Frame = -2 Query: 224 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMVEGAPLETVT--PIPYD 688 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV S+C ++F R K N+ + + KA+G+ + +RQP P V E VT P+ YD Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21_HUMAN (60S ribosomal protein L21 OS=Homo sapiens GN=RPL21 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 76/152 (50.00%), Postives = 103/152 (67.76%), Query Frame = -2 Query: 224 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMV--EGAPLETVTPIPYD 673 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ S+ + F R K+ND+ K + K +G + KRQP P+ V G E + PIPY+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of CB293921 vs. ExPASy Swiss-Prot
Match: RL21_CHILA (60S ribosomal protein L21 OS=Chinchilla lanigera GN=RPL21 PE=2 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = -2 Query: 224 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAMGVEINKQVGNRIIKKRIHVRVEHVHPSRCSEEFKLRKKKNDELKADVKARGEVISTKRQPKGPKPGFMV--EGAPLETVTPIPYD 673 G R TR +F+RP+RK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ S+ + F R K+ND+ K + K +G + KRQP P+ V G E + PIPY+ Sbjct: 6 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157 The following BLAST results are available for this feature:
BLAST of CB293921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293921 ID=CB293921; Name=CB293921; organism=Citrus sinensis; type=EST; length=713bpback to top |