CB293923

Overview
NameCB293923
Unique NameCB293923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:304..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.203e-89
Identity = 148/192 (77.08%), Postives = 170/192 (88.54%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QP+GR+VLNKNIDNFFAENE LAF P ++VPGIYYS+DK+LQ  IF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSRYDP RH E++PIPS V+ G+REK  I KENNFKQPGER+RS++ DRQERF+NRWI AL DPRVTHE+RSIW+ YWSQAD+SLGQK+AS LNVRPSI
Sbjct:  301 QPMGRMVLNKNIDNFFAENEQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.136e-89
Identity = 149/191 (78.01%), Postives = 171/191 (89.53%), Query Frame = -1
Query:  209 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 781
            PVGR+VLNKNIDNFFAENEMLAF+P ++VPGI +SNDKMLQ  IFAYGDTQRHRLGPNYL+LPVNAPKC + NNHYDGFMNFMHRDEEVDYFPS+YDPTRH ER+PIP+ VI GRR++  I KE+NFKQ G+R+RSWAPDRQERFL RW+ AL DPR+T E+RSIWV YWSQAD+S GQK+AS LNVRP++
Sbjct:  302 PVGRMVLNKNIDNFFAENEMLAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 9.319e-89
Identity = 147/192 (76.56%), Postives = 166/192 (86.46%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGRLVLNKNIDNFFAENE LAF P IVVPG+YYS+DKMLQ  IF+Y D+QRHRLGPNYL LP NAPKC H NNH++GFMNF+HRDEEV+YFPSRYDP RH ER+PIP  +  GRREK  I KENNFKQPGER+RSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+ YWSQADRSLGQK+AS L+ RP+I
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 9.319e-89
Identity = 150/192 (78.12%), Postives = 166/192 (86.46%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGRLVLNKNIDNFFAENE LAF P IVVPGIYYS+DK+LQ  IF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEE++YFPSRYDP RH E +PIP  V  GRREK  I KENNFKQPGER+RSWA DRQERF+ RW+ AL DPRVTHE+RSIW+ YWSQAD+S+GQK+AS LNVRPSI
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 2.076e-88
Identity = 144/192 (75.00%), Postives = 166/192 (86.46%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ  +F+Y DTQRHRLGPNYL LP NAPKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RH E+ P+P  ++ G+REK  I KENNFKQPGER+RSW  DRQERF+ RW+ AL DPRVTHE+RSIW+ YWSQADRSLGQK+AS LN++PSI
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.712e-88
Identity = 146/192 (76.04%), Postives = 167/192 (86.98%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGRLVLNKNIDNFFAENE LAF P I+VPG+YYS+DKMLQ  IF+Y D+QRHRLGPNYL+LP NAPK  H NNH++GFMNF+HRDEEV+YFPSRYDP RH E++PIP  V  GRREK  I KENNFKQ GERFRSWAPDRQ+RF+ RW+ AL DPRVTHE+RS+W+ YWSQADRSLGQK+AS LN+RP+I
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.541e-88
Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ  IF+Y DTQRHRLGPNYL LP N+PKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RH ER P+P   + G+REK  I KENNFKQPGER+RSW  DRQERF+ RW+ AL DPRVTHE+RSIW+ YWSQADRSLGQK+AS LN++PSI
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.625e-88
Identity = 146/192 (76.04%), Postives = 166/192 (86.46%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ  IF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP+RH ERYP P  V  G+RE+  I KENNFK+PGER+RSW PDRQERF+ RW+ AL D RVTHE+RSIW+ YWSQADRSLGQK+AS LNVRPSI
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 7.889e-88
Identity = 148/191 (77.49%), Postives = 166/191 (86.91%), Query Frame = -1
Query:  212 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPS 784
            QPVGRLVLNKNIDNFFAENE LAF P I+VPGIYYS+DK+LQ  IF+Y DTQRHRLGPNYL LP NAPKC H NNHYDGFMNFMHRDEE+DYFPSRYDP RH E+YPIP   + G+R+K  I KENNFKQPGER+RS++PDRQERF+NR +  L DPRVTHEVRSIWV YWSQAD+SLGQK+AS LNV+P+
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.295e-87
Identity = 146/192 (76.04%), Postives = 167/192 (86.98%), Query Frame = -1
Query:  209 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVRPSI 784
            QPVGRLVLNKNIDNFFAENE LAF P IVVPG+Y S+DK+LQ  IF+Y D QRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP RH E+YPIP  V+ G+R+K  I KENNFKQPGER+RSWAPDRQERF+ RW+ AL DPRVTHE+RSIW  YWSQAD++LGQK+AS LNVRP++
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
The following BLAST results are available for this feature:
BLAST of CB293923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
CATA2_GOSHI3.203e-8977.08Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA_AVIMR7.136e-8978.01Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA4_SOYBN9.319e-8976.56Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_GOSHI9.319e-8978.13Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA1_SOYBN2.076e-8875.00Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA_PHAAU2.712e-8876.04Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA3_SOYBN3.541e-8875.52Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA1_CUCPE4.625e-8876.04Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA_HELAN7.889e-8877.49Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA3_NICPL2.295e-8776.04Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293923 ID=CB293923; Name=CB293923; organism=Citrus sinensis; type=EST; length=784bp
TTATTTTTTTTTTTAAAAAACAGACTTTTATTAATTGAAACAACCTTAAA
AAAGTCCCATAACATGCAAGTTTATTTTCTATATCTACAATATACAACAG
CAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTC
CTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGA
CACCTTCAAATGCTTGGCCTCACATTGAGACCAGAAGCTACCTTCTGACC
CAGAGATCTGTCGGCCTGAGACCAATAAAAGACCCATATGCTGCGAACCT
CATGGGTGACACGAGGGTCACATAAAGCCTTAATCCATCGATTAAGGAAC
CTCTCTTGCCTGTCTGGGGCCCAGGATCGGAATCTCTCTCCAGGCTGCTT
GAAGTTGTTTTCCTTCACAATGCAAGCCTTCTCACGCCTTCCTGGAATTA
CATCAGAAGGAATGGGATATCTCTCACCATGACGAGTAGGATCATACCTC
GAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACC
ATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCA
TCAAGTAGTTGGGGCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAG
ATTCAACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCAC
GATACCAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGA
TGTTCTTGTTCAAAACCAAGCGTCCAACTGGCTG
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