CB293924

Overview
NameCB293924
Unique NameCB293924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:223..1020. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 387.882 bits (995), Expect = 3.523e-107
Identity = 177/216 (81.94%), Postives = 193/216 (89.35%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            DHED+FDFDPL VTK WPEDI+PLQPVGRLVLNKNIDNFFAENE LAF P IVVPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEE++YFPSRYDP RHAE +PIP  V TGRREK  IEKENNFKQPGERYRSWA DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQAD+S+GQKLAS LNVRPSI
Sbjct:  277 DHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.982e-106
Identity = 176/216 (81.48%), Postives = 197/216 (91.20%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            D ED+FDFDPL  TK WPEDIIPL PVGR+VLNKNIDNFFAENEMLAF+P ++VPGI +SNDKMLQ RIFAYGDTQRHRLGPNYL+LPVNAPKC + NNHYDGFMNFMHRDEEVDYFPS+YDPTRHAER+PIP+ VITGRR++  IEKE+NFKQ G+RYRSWAPDRQERFL RW+ AL DPR+T E+RSIWVSYWSQAD+S GQKLASRLNVRP++
Sbjct:  277 DQEDRFDFDPLDTTKIWPEDIIPLIPVGRMVLNKNIDNFFAENEMLAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.087e-106
Identity = 172/216 (79.63%), Postives = 193/216 (89.35%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            +HED+FDFDPL VTK WPEDIIPLQPVGRLVLNKNIDNFFAENE LAF P IVVPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL LP NAPKC H NNH++GFMNF+HRDEEV+YFPSRYDP RHAER+PIP  + +GRREK  IEKENNFKQPGERYRSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS L+ RP+I
Sbjct:  277 EHEDKFDFDPLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.087e-106
Identity = 173/216 (80.09%), Postives = 193/216 (89.35%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            DHED+FDFDPL VTK WPEDI+PLQPVGRLVLNKNIDNF  ENE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYDP RHAE+YPIPS + TG+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++ L DPR+T+E+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  270 DHEDRFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFSNENEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 6.644e-106
Identity = 173/216 (80.09%), Postives = 195/216 (90.28%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            DHED+FDFDPL VTK WPEDI+PLQPVGRLVLNKNIDNFFAENE LAF P IVVPG+Y S+DK+LQ RIF+Y D QRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP RHAE+YPIP  V+TG+R+K  IEKENNFKQPGERYRSWAPDRQERF+ RW+ AL DPRVTHE+RSIW SYWSQAD++LGQK+ASRLNVRP++
Sbjct:  277 DHEDRFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 1.133e-105
Identity = 172/215 (80.00%), Postives = 195/215 (90.70%), Query Frame = 1
Query:   13 HEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            HED+FDFDPL VTK WPEDI PLQP+GR+VLNKNIDNFFAENE LAF P ++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSRYDP RHAE++PIPS V++G+REK  I KENNFKQPGERYRS++ DRQERF+NRWI AL DPRVTHE+RSIW+SYWSQAD+SLGQK+ASRLNVRPSI
Sbjct:  278 HEDRFDFDPLDVTKTWPEDIFPLQPMGRMVLNKNIDNFFAENEQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 1.133e-105
Identity = 171/216 (79.17%), Postives = 193/216 (89.35%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            DHED++DFDPL VTK WPEDI+PLQPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP+RHAERYP P  V +G+RE+  IEKENNFK+PGERYRSW PDRQERF+ RW+ AL D RVTHE+RSIW+SYWSQADRSLGQKLAS LNVRPSI
Sbjct:  277 DHEDKYDFDPLDVTKTWPEDILPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 5.624e-105
Identity = 173/215 (80.47%), Postives = 192/215 (89.30%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 654
            DHED+ DFDPL VTK WPEDI PLQPVGRLVLNKNIDNFFAENE LAF P I+VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNHYDGFMNFMHRDEE+DYFPSRYDP RHAE+YPIP   ++G+R+K  IEKENNFKQPGERYRS++PDRQERF+NR +  L DPRVTHEVRSIWVSYWSQAD+SLGQK+ASRLNV+P+
Sbjct:  277 DHEDRLDFDPLDVTKTWPEDIFPLQPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 9.594e-105
Identity = 169/216 (78.24%), Postives = 194/216 (89.81%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            +HED+FDFDPL VTK WPEDIIPLQPVGRLVLNKNIDNFFAENE LAF P I+VPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL+LP NAPK  H NNH++GFMNF+HRDEEV+YFPSRYDP RHAE++PIP  V +GRREK  IEKENNFKQ GER+RSWAPDRQ+RF+ RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS LN+RP+I
Sbjct:  277 EHEDKFDFDPLDVTKTWPEDIIPLQPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CB293924 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.636e-104
Identity = 169/216 (78.24%), Postives = 195/216 (90.28%), Query Frame = 1
Query:   10 DHEDQFDFDPLGVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 657
            DHED+FDFDPL VTK WPEDIIPL PVGRLVLNKNIDNFFAENE LAF P ++VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++G MNFMHRDEEV+YFPSR+DP RHAER+PIP  V+TG+R++  IEKENNFKQPGERYR++APDRQERF+ RW+ AL DPRVTHE+RSIW+SYW+QAD+SLGQKLASRLNVRP++
Sbjct:  277 DHEDKFDFDPLDVTKTWPEDIIPLMPVGRLVLNKNIDNFFAENEQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
The following BLAST results are available for this feature:
BLAST of CB293924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_GOSHI3.523e-10781.94Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_AVIMR2.982e-10681.48Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA4_SOYBN5.087e-10679.63Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_NICPL5.087e-10680.09Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA3_NICPL6.644e-10680.09Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA2_GOSHI1.133e-10580.00Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_CUCPE1.133e-10579.17Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA_HELAN5.624e-10580.47Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA_PHAAU9.594e-10578.24Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA_SOLAP1.636e-10478.24Catalase OS=Soldanella alpina PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06df10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293924 ID=CB293924; Name=CB293924; organism=Citrus sinensis; type=EST; length=798bp
GCACTAGGCGATCACGAGGACCAATTTGACTTTGACCCACTGGGCGTAAC
CAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGTGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAAGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTTG
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