CB293975

Overview
NameCB293975
Unique NameCB293975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293975_ssr10 microsatellite CB293975_ssr10:10..21. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:8..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 8.631e-84
Identity = 148/179 (82.68%), Postives = 159/179 (88.83%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VEK++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGP LI DDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQIVL+
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLS 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.284e-83
Identity = 149/179 (83.24%), Postives = 158/179 (88.27%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ+H              WKGETLQEYWWCTE+ALDWGP GGP LI DDGGDATLLIHEGVKAEE Y+K G LPDP+STDNAEFQIVLT
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQEHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKNGALPDPSSTDNAEFQIVLT 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.307e-83
Identity = 149/178 (83.71%), Postives = 156/178 (87.64%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 656
            MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ L+WG GGGP LI DDGGDATLLIHEGVKAEE YEK GK+PDPASTDNAEFQIVL
Sbjct:    1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERCLEWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGKIPDPASTDNAEFQIVL 178
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.246e-82
Identity = 148/179 (82.68%), Postives = 155/179 (86.59%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGP LI DDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLT
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLT 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.246e-82
Identity = 148/179 (82.68%), Postives = 155/179 (86.59%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGP LI DDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLT
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLT 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.246e-82
Identity = 146/179 (81.56%), Postives = 157/179 (87.71%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VE + SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC+E+ALDWGPGGGP LI DDGGD TLLIHEGVKAEE++EKTG+LPDP+STDNAE QIVLT
Sbjct:    1 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCSERALDWGPGGGPDLIVDDGGDVTLLIHEGVKAEEVFEKTGQLPDPSSTDNAEMQIVLT 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.628e-82
Identity = 148/179 (82.68%), Postives = 157/179 (87.71%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGP LI DDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLS 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.126e-82
Identity = 147/178 (82.58%), Postives = 155/178 (87.08%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 656
            MAL+VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWG GGGP LI DDGGDATLLIHEGVKAEE YEK G +PDP STDN EFQ+VL
Sbjct:    1 MALAVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGTIPDPTSTDNPEFQLVL 178
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.055e-81
Identity = 145/179 (81.01%), Postives = 157/179 (87.71%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MALSVEK+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQT VLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGP GGP LI DDGGDATLLIHEGVKAEE Y+K+G +PDPASTDNAEFQIVL+
Sbjct:    1 MALSVEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTGVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSCAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKSGAIPDPASTDNAEFQIVLS 179
[Close]
BLAST of CB293975 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.599e-80
Identity = 143/179 (79.89%), Postives = 156/179 (87.15%), Query Frame = 3 
Query:  123 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPYLIDDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 659
            MALSVEK++SGRE+KVKDL QADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFS+QDH              WKGETL+EYWWCTE+ LDWG GGGP LI DDGGDATLLIHEGVKAEE +EK+GK+PDP STDN EF+IVLT
Sbjct:    1 MALSVEKTSSGREYKVKDLFQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSQDHAAAAIARDSAAVFAWKGETLEEYWWCTERCLDWGVGGGPDLIVDDGGDATLLIHEGVKAEEEFEKSGKVPDPESTDNPEFKIVLT 179
The following BLAST results are available for this feature:
BLAST of CB293975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
SAHH1_ARATH8.631e-8482.68Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_CATRO4.284e-8383.24Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_PHASS7.307e-8383.71Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_TOBAC1.246e-8282.68Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY1.246e-8282.68Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_MEDSA1.246e-8281.56Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_LUPLU1.628e-8282.68Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MESCR2.126e-8282.58Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_PETCR1.055e-8181.01Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_WHEAT2.599e-8079.89Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02de08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02de08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293975 ID=CB293975; Name=CB293975; organism=Citrus sinensis; type=EST; length=659bp
AGCACCAGGTCTCTCTCTCTCGCTTGTACAATCATTCACTTTGTTTGGTT
AGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTCTTTTAGAT
CTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAAATCCGCTA
GCGGGCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGGCCGC
CTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCG
CGCCGAGTTCGGCCCTTCACAGCCTTTCAAAGGAGCCAAGATCACCGGTT
CACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACACTCACCGCT
CTCGGCGCCGAAGTGCGCTGGTGCTCCTGCAACATCTTCTCAACCCAAGA
CCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCCTGGA
AGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCTGGAC
TGGGGTCCCGGCGGCGGCCCATATCTCATCGACGATGACGGTGGTGACGC
CACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGA
CCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCAGATT
GTTTTGACT
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