CB304514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.477e-55 Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 +HAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQ+SLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP NR+F Sbjct: 107 FHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.235e-55 Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQ+SLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF Sbjct: 106 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.229e-54 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQ+SLE+KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF Sbjct: 106 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_DANRE (60S ribosomal protein L10a OS=Danio rerio GN=rpl10a PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.459e-39 Identity = 74/111 (66.67%), Postives = 97/111 (87.39%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH ++L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E+++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 106 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_XENLA (60S ribosomal protein L10a OS=Xenopus laevis GN=rpl10a PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.489e-39 Identity = 73/111 (65.77%), Postives = 97/111 (87.39%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH ++L +KV+E K+T+KFQ+KKVLC+ VAVG++ + E+++ N+ +S+NFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: R10AB_DROME (60S ribosomal protein L10a-2 OS=Drosophila melanogaster GN=RpL10Ab PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.489e-39 Identity = 74/111 (66.67%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPRLLGPGLNKAGKFP L++HQ+S+ K+ E K+T+KFQ+KKVLC+ VAVG++ M+ ++ QNV +S+NFLVSLLKKNWQNVR L++KS+MGP R++ Sbjct: 107 YDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_ICTPU (60S ribosomal protein L10a OS=Ictalurus punctatus GN=rpl10a PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.544e-39 Identity = 73/111 (65.77%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH ++L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E ++ N+ ++VNFLVSLLKKNWQNVR LY+KS+MG R++ Sbjct: 106 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSSMGKPQRLY 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_SPOFR (60S ribosomal protein L10a OS=Spodoptera frugiperda GN=RpL10A PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.241e-39 Identity = 74/111 (66.67%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPRLLGPGLNKAGKFP L++HQ+S+ K++E KAT+KFQ+KKVLC+ VAVG++ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMGP +++ Sbjct: 107 YDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKATIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPPKLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_RAT (60S ribosomal protein L10a OS=Rattus norvegicus GN=Rpl10a PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.235e-38 Identity = 72/111 (64.86%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH +++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_MOUSE (60S ribosomal protein L10a OS=Mus musculus GN=Rpl10a PE=1 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.235e-38 Identity = 72/111 (64.86%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH +++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217 The following BLAST results are available for this feature:
BLAST of CB304514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304514 ID=CB304514; Name=CB304514; organism=Citrus sinensis; type=EST; length=604bpback to top |