CB322105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322105 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 7.246e-46 Identity = 86/108 (79.63%), Postives = 95/108 (87.96%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 +DIILRQH+AKQGCLLVRQSFFHN+P NF D+GGGV+GCRGFHSSFR TQ GLSLNIDVSTTMI++PGPVVDFL+ANQ V P IDWAKAKR LKNLRIKT +N E Sbjct: 206 IDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWAKAKRALKNLRIKTSPANTE 313
BLAST of CB322105 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.367e-44 Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDIILRQH+AKQGCLLVRQSFFHN+P NF D+GGGV+GCRGFHSSFR TQ GLSLNIDVSTTMI++PGPV+DFL+ANQ V P IDW KAKR LKNLRI+T N E Sbjct: 213 LDIILRQHSAKQGCLLVRQSFFHNNPNNFVDLGGGVMGCRGFHSSFRGTQSGLSLNIDVSTTMIVKPGPVIDFLLANQKVDHPDRIDWQKAKRALKNLRIRTTPVNSE 320
BLAST of CB322105 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 5.561e-38 Identity = 75/108 (69.44%), Postives = 87/108 (80.56%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDI+LRQ AK+GCLLVRQSFF +D +N D+ GGV GCRG HSSFRTT GGLSLN+DVSTTMI+ PGPV DFL+ NQNVRD IDW +AK+ LKNLR+K I +N E Sbjct: 186 LDIVLRQQQAKRGCLLVRQSFFSDDFRNLVDLTGGVSGCRGLHSSFRTTIGGLSLNMDVSTTMIVTPGPVFDFLLTNQNVRDIRDIDWPRAKKMLKNLRVKAIHNNME 293
BLAST of CB322105 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.209e-25 Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVG---GG--VLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDI LRQH+AK + + + G GG + CRGFHSSFR T GLSLN+DVSTTMI++PGPV++FL+ NQN+++P IDW KAK LKNLRIKT + E Sbjct: 191 LDITLRQHSAKHARDTASCPSYPSAMDGWMKTGVPKGGREKISCRGFHSSFRPTDSGLSLNVDVSTTMIVRPGPVIEFLLFNQNIKNPHEIDWGKAKCALKNLRIKTTHTGSE 303 The following BLAST results are available for this feature:
BLAST of CB322105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322105 ID=CB322105; Name=CB322105; organism=Citrus sinensis; type=EST; length=325bpback to top |