CB322119

Overview
NameCB322119
Unique NameCB322119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.306e-85
Identity = 161/222 (72.52%), Postives = 176/222 (79.28%), Query Frame = 2
Query:   56 RGINNP--VAALSEDLVKGAASTAV------PGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            R +N+   VAA+SEDLVK    + V          EK VKFKVRAV TV+   KEDFKETLV   D  T+KIGRNVVLEL+ T+VDP+T  PKKS+ AVLKDWSKKSN KAERVHYTAEF VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHP KRI F NQPYLPSETP GLR LREKEL+++RG GKG RKLSDRIYDYDV
Sbjct:   50 RAVNSSGVVAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDV 271          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.185e-81
Identity = 152/221 (68.78%), Postives = 172/221 (77.83%), Query Frame = 2
Query:   53 RRGINNPVAALSEDLVKGAASTAVPGAAEKP------VKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            R+  +  VAA+SEDLVK    +   G  +        VKFKVRAV+TV+   KED KETLV   D   +KIGRN+VLEL+ T++DP+TK PKKS  AVLKDWSKKS  KAERVHYTAEF VD+ FG+PGAITV NKHQKEFFLE+ITIEGFA GPVHF CNSWVQS KDHP KRIFF NQPYLP+ETP GLR LREKELK++RG G GVRKLSDRIYD+DV
Sbjct:   45 RKTKSGVVAAISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDV 265          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 4.522e-65
Identity = 125/215 (58.14%), Postives = 156/215 (72.56%), Query Frame = 2
Query:   74 VAALSEDLVKGAASTAVP----GAAEK---PVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIE--GFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDY 691
            VAA+SE++ + AAS +      GA E+   P K  +RA LTV++  KED KE +    D L + +GRNVVLEL+ T++ PRTK P +S    +KDW +K   K + V YTAEF VD++FG PGAI VAN+H +EFFLE+I +E  G  CGPVHF CNSWVQST++ P KR+FF+N+PYLPSETP GLR LREKELKD+RG G GVRKLSDRIYDY
Sbjct:   45 VAAISEEVPRLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDY 259          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.505e-60
Identity = 117/233 (50.21%), Postives = 154/233 (66.09%), Query Frame = 2
Query:   35 AGAAGVRRGINN--------PVAALSEDLVKGAASTAVPGAAEKPV----KFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            AG+ G+ +G +         PV AL E +V   A       A +P         RAV+TV++  KED K+    Q D L +++GR+V+LELV TE DPR   PKKS+ + L  W  K +VKAERV YTAEF VD+ FG PGA+TV N+HQ+EF++E+I +EGF  GP HF CNSWVQ T+    +R+FF+N+PYLPSETP GLR LR +EL D+RG G G R+++DR+YDYDV
Sbjct:   15 AGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDV 247          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 79/181 (43.65%), Postives = 109/181 (60.22%), Query Frame = 2
Query:  158 VRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAER-VHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            V AV+ ++K IKE   E   +Q ++  + IG+ ++++LV  E+DP T   +KS E+ +    K   VK  R + +TA+F V  NFG PGAI V N    E  L  I IE  +   + F  N+W+ S  D+P  RI F +QP LPSETP G++ LREK+L  +RG GKG RK  +RIYDYDV
Sbjct:   82 VTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKA--VKDPRYLVFTADFTVPINFGKPGAILVTNLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDV 259          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27
Identity = 70/195 (35.90%), Postives = 107/195 (54.87%), Query Frame = 2
Query:  137 EKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGT-EVDPRT-KGPKKSREAVLKDWSKK--SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGP-----VHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVR-KLSDRIYDY 691
            +K    K+   + V K    DFK+ + +  D + E +GR V L L+ + + DP   K  +  + A L+ W  K  ++V AE   +   F  D + G P A  + N H  +F+L+++T+ GF  G      +HF CNSW+     +   R+FF+N+ YLPSETP  ++ LRE+ELK++RG  KG   K  DR+YDY
Sbjct:   28 KKTTTMKIEGEVVVMKKNLLDFKDVMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDY 222          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 73/185 (39.46%), Postives = 100/185 (54.05%), Query Frame = 2
Query:  155 KVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKG--PKKSREAVLKDWSKK-SNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            KV+  + + K    DF +   +  D + E +G+ V  +L+ +       G   K S  A L+++    + + A    +   F  +  FG PGA  + N H  EFFL+++T+E     G VHF CNSWV  +  +   RIFFANQPYLPSETP  LR  RE EL  +RG G G R+  DRIYDYDV
Sbjct:   18 KVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVPGAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSETPELLRKYRENELVTLRGDGTGKREAWDRIYDYDV 202          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27
Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  128 GAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKS--REAVLKDW-SKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGF-ACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDY 691
            G  E   K     V+ +KKN+  DF +   +  D L E +G  + L LV ++V     G K    + A L+DW +  +++ A    +   F  +++FG PGA  + N H  EF L+++T+E     G VH+ CNSW+   K +   R+FF+N+ YLP ETP  L   RE+EL  +RGTG+G  K  DR+YDY
Sbjct:   12 GGNETTTKKVKGTVVLMKKNVL-DFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDY 202          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 81/215 (37.67%), Postives = 119/215 (55.35%), Query Frame = 2
Query:   77 AALSEDLVKGAASTAVPGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITI---EGFACGPV-HFQCNSWVQ----STKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDYDV 697
            A+ S    +G +S+ +  AA      +V+AV T+K  + E     L+N+   + + IGR++ LELV +E+D +T   K +  +   +     +     V Y A+F V S FG  GAI V N+ ++E FLE I +   +G     V   +CNSWVQ      +  P KRIFFAN+ YLP +TP GLR+ R+ +L+  RG G G R+  DR+YDYDV
Sbjct:   63 ASSSATASRGDSSSDMAAAAA----VRVKAVATIKVTVGE-----LINRSIDIRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDH---SVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDV 265          
BLAST of CB322119 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26
Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 2
Query:  104 GAASTAVPGAAEKPVKFKVRAVLTVKKNIKEDFKETLVNQFDVLTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDW-SKKSNVKAERVHYTAEFLVDSN-FGTPGAITVANKHQKEFFLETITIEGFA-CGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPVGLRALREKELKDIRGTGKGVRKLSDRIYDY 691
            G    A+ G  ++P K K R +L +KKN+  DF     +  D +++ +G+ V ++L+   V+      K S  A L+ W +  + + A    ++  F  D + FG PGA  + N H  EFFL+++T+E     G +HF CNSWV     +   RIFFANQ YLPSETP  LR  RE EL  +RG G G  +  DR+YDY
Sbjct:    4 GGIVDAILGKDDRP-KVKGRVIL-MKKNVL-DFINIGASVVDGISDLLGQKVSIQLISGSVNYDGLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHLNEFFLKSLTLEDVPNYGKIHFVCNSWVYPAFRYKSDRIFFANQAYLPSETPQPLRKYRENELVALRGDGTGKLEEWDRVYDY 199          
The following BLAST results are available for this feature:
BLAST of CB322119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX4_ARATH2.306e-8572.52Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX3_ARATH1.185e-8168.78Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ4.522e-6558.14Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX5_ORYSJ1.505e-6050.21Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOX6_ARATH2.265e-3243.65Lipoxygenase 6, choloroplastic OS=Arabidopsis thal... [more]
LOX5_ARATH2.194e-2735.90Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOXA_SOLLC4.888e-2739.46Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_ARATH6.384e-2736.98Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOXC1_ORYSJ1.422e-2637.67Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOXB_SOLLC9.218e-2638.19Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]

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Properties
Property NameValue
Genbank descriptionEST0230 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB100 similar to lipoxygenase (acc# CAC43237), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322119 ID=CB322119; Name=CB322119; organism=Citrus sinensis; type=EST; length=697bp
ACCCGTGCAACAGAGAAGAGTGCATTCGAGGAAAGCAGGAGCAGCAGGTG
TGAGGAGGGGGATTAATAATCCTGTGGCTGCTCTAAGTGAAGATTTGGTA
AAAGGAGCTGCTTCCACTGCCGTGCCCGGGGCTGCTGAAAAGCCAGTGAA
GTTTAAGGTGAGGGCTGTGCTGACGGTGAAGAAGAACATCAAAGAAGATT
TCAAAGAGACCCTTGTTAATCAGTTTGATGTTTTAACTGAAAAGATTGGC
AGAAATGTCGTTCTGGAACTTGTCGGCACTGAAGTTGATCCCAGAACAAA
GGGACCAAAGAAAAGCAGAGAAGCAGTTCTGAAGGATTGGTCAAAGAAAT
CAAATGTTAAGGCTGAACGGGTCCATTACACGGCTGAATTTTTAGTGGAC
TCAAATTTTGGGACGCCTGGTGCAATCACAGTTGCCAATAAGCACCAAAA
GGAATTCTTTTTGGAAACTATTACCATTGAAGGTTTTGCTTGTGGCCCTG
TTCATTTCCAATGCAATTCTTGGGTTCAATCCACAAAAGATCATCCTGGA
AAAAGGATATTCTTCGCTAATCAGCCATATTTACCAAGTGAGACGCCAGT
TGGGCTTAGAGCACTAAGGGAGAAAGAGCTCAAAGACATCAGAGGCACAG
GCAAAGGAGTTAGAAAATTATCGGACAGAATTTATGACTATGATGTG
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