CB417324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417324 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.134e-45 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCREFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 +DIILRQH+AKQGCLLVRQSFFHN+P NF D+GGGV+GCR FHSSFR TQ GLSLNIDVSTTMI++PGPVVDFL+ANQ V P IDWAKAKR LKNLRIKT +N E Sbjct: 206 IDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWAKAKRALKNLRIKTSPANTE 313
BLAST of CB417324 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.157e-43 Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCREFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDIILRQH+AKQGCLLVRQSFFHN+P NF D+GGGV+GCR FHSSFR TQ GLSLNIDVSTTMI++PGPV+DFL+ANQ V P IDW KAKR LKNLRI+T N E Sbjct: 213 LDIILRQHSAKQGCLLVRQSFFHNNPNNFVDLGGGVMGCRGFHSSFRGTQSGLSLNIDVSTTMIVKPGPVIDFLLANQKVDHPDRIDWQKAKRALKNLRIRTTPVNSE 320
BLAST of CB417324 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 4.708e-37 Identity = 74/108 (68.52%), Postives = 86/108 (79.63%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCREFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDI+LRQ AK+GCLLVRQSFF +D +N D+ GGV GCR HSSFRTT GGLSLN+DVSTTMI+ PGPV DFL+ NQNVRD IDW +AK+ LKNLR+K I +N E Sbjct: 186 LDIVLRQQQAKRGCLLVRQSFFSDDFRNLVDLTGGVSGCRGLHSSFRTTIGGLSLNMDVSTTMIVTPGPVFDFLLTNQNVRDIRDIDWPRAKKMLKNLRVKAIHNNME 293
BLAST of CB417324 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.796e-24 Identity = 58/113 (51.33%), Postives = 73/113 (64.60%), Query Frame = 2 Query: 2 LDIILRQHAAKQGCLLVRQSFFHNDPKNFADVG---GG--VLGCREFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRIKTITSNQE 325 LDI LRQH+AK + + + G GG + CR FHSSFR T GLSLN+DVSTTMI++PGPV++FL+ NQN+++P IDW KAK LKNLRIKT + E Sbjct: 191 LDITLRQHSAKHARDTASCPSYPSAMDGWMKTGVPKGGREKISCRGFHSSFRPTDSGLSLNVDVSTTMIVRPGPVIEFLLFNQNIKNPHEIDWGKAKCALKNLRIKTTHTGSE 303 The following BLAST results are available for this feature:
BLAST of CB417324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417324 ID=CB417324; Name=CB417324; organism=Citrus sinensis; type=EST; length=325bpback to top |