CB417418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417418 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24 Identity = 71/149 (47.65%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 70 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR 504 MAS+LALKRL+S ++ PR+ R + P+ +S R FNTNAVR Y TRS+SQVLN MDQ E+P S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR Sbjct: 1 MASALALKRLLSSSIAPRS-RSVLRPAVSS--RLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIR 144
BLAST of CB417418 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24 Identity = 73/150 (48.67%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 73 ASSLALKRLVSFNLI--PRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR 504 +S+LAL+RL+S + + PRALR V P A S SR FNTNA R Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR Sbjct: 4 SSALALRRLLSSSTVAVPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIR 146
BLAST of CB417418 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.320e-22 Identity = 66/145 (45.52%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 70 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR 504 MASSLALKR +S L+ + + P A+SASR FNTNA+RQY RSLSQVLN +D +T++P S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ Sbjct: 1 MASSLALKRFLSSGLLSSSF---LRPVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIK 138
BLAST of CB417418 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.861e-18 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 391 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRR 549 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RR Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARR 164 HSP 2 Score: 39.6614 bits (91), Expect = 1.861e-18 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 1 Query: 70 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQY 198 MASSL KR +S +L+ R+L + P+A+++ R F+TNA+RQY Sbjct: 1 MASSLIAKRFLSSSLLSRSL---LRPAASASHRSFDTNAMRQY 40 HSP 3 Score: 25.7942 bits (55), Expect = 1.861e-18 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 285 CV*SIFTNKEPEPGPELHGSDDGE 356 CV SIF++ E EPG E G G+ Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQ 95
BLAST of CB417418 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18 Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 76 SSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR 504 +S+AL+RL S NL+ + + S SR FNTNA TRS+ Q++N MDQ+ E+PF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ Sbjct: 2 ASMALRRLASRNLVSGGIFRPL-----SVSRSFNTNAQMGRVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIK 142 The following BLAST results are available for this feature:
BLAST of CB417418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417418 ID=CB417418; Name=CB417418; organism=Citrus sinensis; type=EST; length=549bpback to top |