CB417434

Overview
NameCB417434
Unique NameCB417434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11633 contig Csv1_Contig11633:57..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.054e-104
Identity = 190/208 (91.35%), Postives = 197/208 (94.71%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSDPSVQSD++ WPFKV+ GPGDKPMIVVTYKGEEKQFA EEISSMVLTKMKEIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGLDKKAS +GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSAGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 6.392e-102
Identity = 184/208 (88.46%), Postives = 195/208 (93.75%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGRRFSD SVQ DM+ WPFKV+ GPGDKPMIVVTYKGEEK+FA EEISSMVLTKMKEIAEA+LG  +KNAVVTVPAYFNDSQRQATKDAG I+GLNVMRIINEPTAAAIAYGLDKKA+ +GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAKRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSAGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 362.459 bits (929), Expect = 1.020e-99
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            M+GK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDM+ WPFK+ AGP DKPMI V YKGEEK+FA EEISSMVL KM+EIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGLDKKA+  GEKNVLIFDLGG
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 362.073 bits (928), Expect = 1.333e-99
Identity = 184/208 (88.46%), Postives = 194/208 (93.27%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYS VGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQ+DM+H PFKVV+GPG+KPMI V YKGEEKQFA EEISSMVLTKMKEIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG I+GLNVMRIINEPTAAAIAYGLDKKA+  GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.333e-99
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDM+ WPFKV+ GPGDKPMIVV YKGEEKQF+ EEISSMVL KMKEIAEA+LG  +KNAVVTVPAY NDSQRQATKDAG I+GLNVMRIINEPTAAAIAYGLDKKA+  GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 3.878e-99
Identity = 179/203 (88.18%), Postives = 191/203 (94.09%), Query Frame = 2
Query:   17 EGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            EGK+IGIDLGTTYSCVGVWQNDRVEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSD SVQ+DM+ WPFKV   P DKPMIVV YKGEEK+F+ EEISSMVL KM+E+AEA+LG A+KNAVVTVPAYFNDSQRQATKDAGAI+GLNV+RIINEPTAAAIAYGLDKKASR GE+NVLIFDLGG
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGG 207          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 1.629e-97
Identity = 178/208 (85.58%), Postives = 191/208 (91.83%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSD + WPF +++G  +KPMIVV YKGEEKQFA EEISSMVL KM+EIAEA+LG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGLDKKA+  GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.128e-97
Identity = 176/208 (84.62%), Postives = 192/208 (92.31%), Query Frame = 2
Query:    2 MAGKVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            MAGK EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF+D SVQSD++ WPF + +GP +KPMIVV YKGE+K+F+ EEISSM+L KM+EIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGLDKKA+  GEKNVLIFDLGG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGG 208          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 349.747 bits (896), Expect = 6.845e-96
Identity = 179/205 (87.32%), Postives = 187/205 (91.22%), Query Frame = 2
Query:   11 KVEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            K EG +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFS P+VQS M+ WP + + G GDKPMIV  YKGEEKQFA EEISSMVL KMKEIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGLDKKA+ SGEKNVLIFDLGG
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGG 206          
BLAST of CB417434 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.427e-93
Identity = 167/204 (81.86%), Postives = 184/204 (90.20%), Query Frame = 2
Query:   14 VEGKSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVAGPGDKPMIVVTYKGEEKQFAPEEISSMVLTKMKEIAEAYLGQALKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGG 625
            V+G S+GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP+ Q+D++HWPFKV  G GDKP I V +KGE K F PEEISSMVL KMKE+AEA++G A+ NAV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPT AAIAYGLDKK    GE+NVLIFDLGG
Sbjct:    4 VQGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDPATQADIKHWPFKVTPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTRAAIAYGLDKK---GGERNVLIFDLGG 204          
The following BLAST results are available for this feature:
BLAST of CB417434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY1.054e-10491.35Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_SOLLC6.392e-10288.46Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP71_ARATH1.020e-9987.50Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7E_SPIOL1.333e-9988.46Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC1.333e-9987.50Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP70_SOYBN3.878e-9988.18Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP72_ARATH1.629e-9785.58Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP73_ARATH2.128e-9784.62Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE6.845e-9687.32Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_ACHKL1.427e-9381.86Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]

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Properties
Property NameValue
Genbank descriptionEST0538 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P354 similar to 70 kDa heat shock protein (acc# P09189), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417434 ID=CB417434; Name=CB417434; organism=Citrus sinensis; type=EST; length=627bp
AATGGCTGGAAAAGTTGAAGGCAAGTCTATTGGCATAGACCTTGGCACGA
CTTACAGCTGCGTTGGAGTATGGCAAAACGACCGCGTAGAGATCATAGCC
AACGATCAAGGCAACAGAACCACTCCATCTTATGTAGCCTTCACAGACAC
CGAACGTCTGATCGGCGATGCGGCTAAAAACCAAGTTGCCATGAACCCTC
AGAACACCGTTTTTGATGCCAAACGACTCATCGGGAGGCGCTTCTCCGAC
CCGTCGGTTCAAAGCGACATGAGGCACTGGCCTTTTAAGGTTGTTGCAGG
CCCTGGTGACAAGCCCATGATTGTTGTTACTTATAAAGGCGAAGAGAAGC
AGTTTGCTCCCGAAGAGATTTCTTCTATGGTGTTGACCAAGATGAAGGAG
ATAGCCGAGGCTTATCTCGGTCAAGCCTTGAAAAATGCTGTGGTTACTGT
TCCAGCTTATTTTAATGACTCTCAGAGGCAAGCAACGAAGGATGCTGGTG
CTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCCTACTGCTGCT
GCTATTGCTTATGGCTTGGACAAGAAGGCATCGAGGAGTGGTGAGAAGAA
CGTGCTGATATTCGATCTCGGTGGTGG
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