CB610634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_BOVIN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus GN=PHYHD1 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.385e-45 Identity = 95/189 (50.26%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKNGLVREV 734 G++VLE F S +E EAM++++D ++ D C T FST ++++ + DYF S +KI FFFE+ F GN P E SINK+GHALH LDP+F+ + S K L SLG + PV +QSMYIFKQP GGEV PH D SFL TEP GLW+ALEDA + NGCLW IPGSH G+ R + Sbjct: 16 GFLVLEGFLSADECEAMQRRIDEIVAKMDVPLHCRTE--FSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDKQGNFLVPPEKSINKIGHALHALDPIFRCVTHSHKVQALARSLGLQMPVVVQSMYIFKQPHFGGEVAPHQDASFLYTEPLGRVLGLWIALEDAMLENGCLWFIPGSHTGGVSRRM 202
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_DANRE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio GN=phyhd1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.149e-44 Identity = 92/190 (48.42%), Postives = 121/190 (63.68%), Query Frame = 3 Query: 192 QGYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKVTD----DYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKNGLVREV 734 +GY+VLE S EE +A+R++M +++ D C T FST + +++ DYF S +KI FFFE+ F D G PKE S+NK+GHALH +P+FK+ + S K N+ L PV +QSMYIFKQPGIGGEV PH D +FL T+P G+WVALEDA NGCLW IPGSH +G+ R + Sbjct: 15 EGYLVLEGLLSPEECDALRRRMSEIIESMDVPEHCRTQ--FSTDHDEQLKTQGNADYFITSGDKIRFFFEKGVFDDKGEFVVPKEQSLNKIGHALHAYEPLFKRVTHSPKVQNICKKLELINPVILQSMYIFKQPGIGGEVTPHQDATFLYTQPLGRVMGVWVALEDAMQENGCLWFIPGSHNDGITRRM 202
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_HUMAN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Homo sapiens GN=PHYHD1 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.393e-43 Identity = 94/189 (49.74%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKNGLVREV 734 G++VLE F S EE AM++++ ++ D C T FST ++++ + DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVFK + S K L SLG + PV +QSMYIFKQP GGEV PH D SFL TEP G+W+A+EDAT+ NGCLW IPGSH +G+ R + Sbjct: 16 GFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRM 202
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_MOUSE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus GN=Phyhd1 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.793e-41 Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKVTD----DYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKNGLVREV 734 G+++LE F + +E AM++++ ++ D C T FST +++ DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVF+ + S K L+ SLG + PV +QSMYIFKQP GGEV PH D +FL TEP GLW+A+EDA + NGCLW IPGSH G+ R + Sbjct: 16 GFLLLEGFFTADECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQLQTQGKTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSPKVQALVRSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIAMEDAMLENGCLWFIPGSHTRGVSRRM 202
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_CAEEL (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Caenorhabditis elegans GN=Y105C5B.9 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.450e-41 Identity = 82/178 (46.07%), Postives = 120/178 (67.42%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFDCST--SSVFSTTNQQK-VTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKN 716 G+VV+E+ +D+EI+ M+K + +++ D + SVFST ++ K D YF S++KI FFFEE A DG L PK+ ++NK+GH LH LDP F+K + + K N+ +GY+ P +QSMYIFKQP IGG V H D++FL +P TG+W+A+++A++ NGCL IPGSHK+ Sbjct: 12 GFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYFLNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFIPGSHKD 189
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_RAT (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Rattus norvegicus GN=Phyhd1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40 Identity = 88/189 (46.56%), Postives = 117/189 (61.90%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKNGLVREV 734 G+++LE F + +E M++++ ++ D C T FST +++ DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVF+ + S K L+ SLG + PV +QSMYIFKQP GGEV PH D +FL TEP GLW+A EDA + NGCLW IPGSH +G+ R + Sbjct: 16 GFLLLEGFFTADECVVMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQLQTQGNTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSPKVQALVRSLGLQIPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIATEDAMLENGCLWFIPGSHTSGVSRRM 202
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_DICDI (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=phyhd1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40 Identity = 83/179 (46.37%), Postives = 120/179 (67.04%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFDC-STSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEPSTCTGLWVALEDATIMNGCLWAIPGSHKNGLVR 728 G++++ +F + EEI+ +R +M L+D D ST S+F+T+ Q++ DDYF S +KI +FFE+ + +DG L PK+++ NKVGHALH+L+P F++FS S+K +L++SLG MYIFK IGGEV H D++FL T P T +W A ED+TI NGCL +PGSH G+ R Sbjct: 15 GFLIIRNFNTTEEIDIVRGEMKKLIDELDTPSTISIFTTSEQERKVDDYFLGSGDKIRYFFEKGSI-EDGKLIVPKDMAFNKVGHALHDLNPKFEEFSYSQKIHDLIYSLGIYNKALSGIMYIFKNQKIGGEVDIHQDSTFLHTTPLTTHAIWFAFEDSTIENGCLRGLPGSHTEGITR 192
BLAST of CB610634 vs. ExPASy Swiss-Prot
Match: PHYD1_CAEBR (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Caenorhabditis briggsae GN=CBG00325 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.637e-39 Identity = 80/178 (44.94%), Postives = 117/178 (65.73%), Query Frame = 3 Query: 195 GYVVLESFASDEEIEAMRKQMDHLLDGFDCST--SSVFSTTNQQK-VTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPH*DNSFLITEP-STCTGLWVALEDATIMNGCLWAIPGSHKN 716 G+VV+E+ +D+EIE ++ + +++ + + SVFST ++ K D YF S++KI FFFEE A DG L PK+ ++NK+GH LH LDP FKK + + K + +GY+ P +QSMYIFKQP IGG V H D++FL P TG+W+A+++A++ NGCL IPGSHK+ Sbjct: 12 GFVVIENVFNDQEIEEIKGAIGKIVEDMNLAEHPKSVFSTYDEDKHAADSYFLNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHLLDPTFKKMTFNSKIQKIFQGIGYQEPEVVQSMYIFKQPKIGGAVTDHVDSTFLRVNPIDHLTGVWIAIDEASVENGCLSFIPGSHKD 189 The following BLAST results are available for this feature:
BLAST of CB610634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB610634 ID=CB610634; Name=CB610634; organism=Citrus sinensis; type=EST; length=736bpback to top |