CB610635

Overview
NameCB610635
Unique NameCB610635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length196
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.503e-16
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            D+ A AVLSGNRNF     PLTRANYLA   LVVAYALAGTVDIDFEKEPIG G+
Sbjct:  529 DVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGVGK 583          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.503e-16
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            DI A AVLSGNRNF     PLTRANYLA   LVVAYALAGTVDIDFEKEPIG G+
Sbjct:  529 DIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKGK 583          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            DI A AVLSGNRNF     PLTRANYLA   LVVAYALAGTVDIDFE EPIG G+
Sbjct:  394 DIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFESEPIGVGK 448          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.270e-15
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            D+ A AVLSGNRNF     PLTRANYLA   LVVAYALAGTVDIDFE +PIGTG+
Sbjct:  529 DLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGK 583          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_SOLTU (Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.058e-15
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            DI A AVLSGNRNF      LTRANYLA   LVVAYALAGTVDIDFEK+PIG G+
Sbjct:  247 DIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGK 301          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.606e-15
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGTGE 169
            DI A AVLSGNRNF     PLTRANYLA   LVVAYALAGTV+IDFE EPIG G+
Sbjct:  621 DIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVNIDFETEPIGKGK 675          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.628e-15
Identity = 41/53 (77.36%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    5 DIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGT 163
            DI   AVLSGNRNF     P TRANYLA   LVVAYALAGTVDIDFEKEPIGT
Sbjct:  626 DIIPAAVLSGNRNFEGRVHPQTRANYLASPPLVVAYALAGTVDIDFEKEPIGT 678          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.282e-14
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIGT 163
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGT+ IDFEKEP+GT
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGT 577          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIG 160
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGTV IDFEKEP+G
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLG 576          
BLAST of CB610635 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 2
Query:    2 GDIXAVAVLSGNRNFGSXPFPLTRANYLADRSLVVAYALAGTVDIDFEKEPIG 160
            GD+ AV VLSGNRNF     P TRANYLA   LV+AYA+AGTV IDFEKEP+G
Sbjct:  524 GDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLG 576          
The following BLAST results are available for this feature:
BLAST of CB610635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ACOC_ORYSJ3.503e-1676.36Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACOC_CUCMA3.503e-1678.18Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACOC_CUCMC1.019e-1576.36Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
ACO1_ARATH2.270e-1574.55Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACOC_SOLTU5.058e-1574.55Aconitate hydratase, cytoplasmic (Fragment) OS=Sol... [more]
ACO2M_ARATH6.606e-1574.55Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACO3M_ARATH8.628e-1577.36Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_RABIT4.282e-1468.52Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]
ACOC_RAT1.246e-1369.81Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_MOUSE1.246e-1369.81Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIaF_C09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIaF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610635 ID=CB610635; Name=CB610635; organism=Citrus sinensis; type=EST; length=196bp
GGGTGACATTNNTGCCGTTGCTGTGCTTTCCGGTAATCGGAACTTTGGAT
CNNGTCCCTTTCCTTTGACAAGAGCTAACTATCTTGCAGATCGATCATTA
GTTGTTGCTTATGCCCTTGCTGGCACAGTTGACATAGACTTTGAAAAGGA
GCCAATTGGAACTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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