CB610753

Overview
NameCB610753
Unique NameCB610753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4944 contig Csv1_Contig4944:508..1055. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB610753 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.443e-13
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 2 
Query:    5 SVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 136
            SVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   68 SVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of CB610753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN1.443e-1375.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_C09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610753 ID=CB610753; Name=CB610753; organism=Citrus sinensis; type=EST; length=549bp
GGGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGTATCGGTG
CAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGTTTATGAC
TGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTGAGTGGATGA
TACGCTCCAGCGATGTAAATGAATGTGATGGGTCACCAACTCACCGGATG
AGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTCGCAACG
TGTCCTTGTCGTTTTGTTAATGCTATTTGTATTACGTGTCCTTCCTATCT
AAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAACTAAAGACTGTGA
TGTTTTTATATCATATAATTTAATAATTGTATGTGATGTGAGGATTGCTA
AGCTGTGGGCGGAGATGAAAGGTTGCTGGTTTTTGGGTTTAGGACATGTT
TTTGATTGTCATTTTGTAAGAGCCAAGATCATCCCTTCGTGGACGGTCGT
GATGAGCATATATGTTTTATTATTAATAAATAAGTTGCTTCTCTCAAAA
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