CB610755

Overview
NameCB610755
Unique NameCB610755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: BEM46_SCHPO (Protein bem46 OS=Schizosaccharomyces pombe GN=bem46 PE=2 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 4.618e-36
Identity = 87/206 (42.23%), Postives = 127/206 (61.65%), Query Frame = 1
Query:    7 GSMVSFV-NALLY-GVGGIVMAGMAL--LVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFI--KLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 606
            GS+ S + N L Y G+  + +  +AL  L  +Q+ LVY    P  ++    TP    + YE + LR+ D V L ++ +     P+ R PT+L+F  NAGN+ HRL + R+    L+ NVF++SYRGYG+S G PS+ G+  D+Q ALE+L +      T+IVV+G+S+GGAV   LT  N D+++ALILENTFTSI DM   + P+
Sbjct:    3 GSLSSAIFNVLKYSGMASLAVTLIALGFLYKYQKTLVYPSAFPQGSRENVPTPKEFNMEYERIELRTRDKVTLDSYLMLQSESPESR-PTLLYFHANAGNMGHRLPIARVFYSALNMNVFIISYRGYGKSTGSPSEAGLKIDSQTALEYLMEHPICSKTKIVVYGQSIGGAVAIALTAKNQDRISALILENTFTSIKDMIPTVFPY 207          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: ABHDD_DANRE (Abhydrolase domain-containing protein 13 OS=Danio rerio GN=abhd13 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.877e-36
Identity = 80/188 (42.55%), Postives = 122/188 (64.89%), Query Frame = 1
Query:   52 GIVMAGMA-LLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPD--CRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 606
            G+++A +A +L  FQ+ L+Y P  P  ++ Y   P+ +   +E+V++R+ DG+ L+   ++   +     PTIL+F  NAGNI HR+    +ML  L  NV ++ YRGYG+S+G PS+ G+ +DA+A L+++  R DID T++V+FGRSLGGAV   L   NP +VAA+++ENTF SI  MA  L  F
Sbjct:   47 GLILASLAGILYKFQDVLLYFPDQPSSSRLYVPMPTGIP--HENVYIRTKDGIRLNLILLRYTGENPAGAPTILYFHGNAGNIGHRVPNALLMLVNLKANVVLVDYRGYGKSEGDPSEDGLYQDAEATLDYVMTRPDIDKTKVVLFGRSLGGAVAIRLASCNPHRVAAIMVENTFLSIPHMAATLFSF 232          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: ABHDD_XENLA (Abhydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.065e-32
Identity = 73/180 (40.56%), Postives = 111/180 (61.67%), Query Frame = 1
Query:   76 LLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPDCRG--PTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFL 609
            +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++++ D + L+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+SDG PS+ G+  D++A L+++  R DID T+I++FGRSLGGAV   L   N  ++ AL+LENTF SI  MA  L   L
Sbjct:   56 ILFKFQDVLLYFPDQPSSSRLYIPMPTGIP--HENIFIKTKDNIRLNLILLRYTGDNSSFSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLILVDYRGYGKSDGEPSEEGLYMDSEAVLDYVMTRPDIDKTKIILFGRSLGGAVAIHLASENAHRICALVLENTFLSIPHMASTLFSVL 233          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: ABHDD_CHICK (Abhydrolase domain-containing protein 13 OS=Gallus gallus GN=ABHD13 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.900e-32
Identity = 73/194 (37.63%), Postives = 118/194 (60.82%), Query Frame = 1
Query:   49 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPD--CRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 606
            GGI++  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++++ DGV L+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R+D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIILLLLIFVSIAGILYKFQDMLLYFPEQPSSSRLYVPMPTGIP--HENIFIKTKDGVLLNLILLRYTGDNAAYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLILVDYRGYGKSEGEASEEGLYIDSEAVLDYVMTRSDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: ABHDD_HUMAN (Abhydrolase domain-containing protein 13 OS=Homo sapiens GN=ABHD13 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.177e-31
Identity = 74/194 (38.14%), Postives = 117/194 (60.31%), Query Frame = 1
Query:   49 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPDCR--GPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 606
            GGI++  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++R+ DG+ L+   I+   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIILLLLIFISIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIP--HENIFIRTKDGIRLNLILIRYTGDNSPYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: ABHDD_MOUSE (Abhydrolase domain-containing protein 13 OS=Mus musculus GN=Abhd13 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.008e-31
Identity = 74/194 (38.14%), Postives = 117/194 (60.31%), Query Frame = 1
Query:   49 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPDCRG--PTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 606
            GGIV+  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++R+ DGV L+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T++ +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIVLLLLIFVSIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIP--HENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIGHRLPNALLMLVNLRVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: YN60_YEAST (Uncharacterized membrane protein YNL320W OS=Saccharomyces cerevisiae GN=YNL320W PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.483e-23
Identity = 67/194 (34.54%), Postives = 102/194 (52.58%), Query Frame = 1
Query:   37 LYGVGGIVMAGMALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWF 618
            L G+  +    +A L  +Q +LVY     G  +++  TP    + YE + L + D + L AW IK   +    T+L    NAGNI + + ++ I  ++   +VF+ SYRGYG S+G PS+ G+  DA   + HLS  +     ++V++GRSLGGA    +     D    +ILENTF SI  +   + P LK F
Sbjct:   10 LGGLVALTTISVATLYHYQNRLVYPSWAQG-ARNHVDTPDSRGIPYEKLTLITQDHIKLEAWDIK--NENSTSTVLILCPNAGNIGYFILIIDIFYRQFGMSVFIYSYRGYGNSEGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILENTFLSIRKVIPYIFPLLKRF 200          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: Y2307_MYCTU (Uncharacterized protein Rv2307c/MT2364 OS=Mycobacterium tuberculosis GN=Rv2307c PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.957e-22
Identity = 64/186 (34.41%), Postives = 100/186 (53.76%), Query Frame = 1
Query:   55 IVMAGMALLV-AFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVCLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFL 609
            +V +G+ + + + Q +L+Y P    +  + S+ P+       DV + + DG+ L  W+        GP +L    NAG+ + R E+  + L  L  +V +  YRGYG + G PS+ G+  DA+AA E LS ++D+D  RI  FG SLG AV   L    P   AAL+L + FTS+ ++  V  P+L
Sbjct:   17 LVASGVIMFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGGWYFPHTSGGSGPAVLVCNGNAGDRSMRAELA-VALHGLGLSVLLFDYRGYGGNPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFGESLGAAVAVGLAVQRPP--AALVLRSPFTSLAEVGAVHYPWL 194          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: YHFR_ECO57 (Uncharacterized protein yfhR OS=Escherichia coli O157:H7 GN=yhfR PE=3 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.763e-19
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  175 EDVWLRSSDGVCLHAWFIKLFPDCRGP------TILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLP 603
            E V   + DG  L  WFI   P   GP      TI+    NAGN++    +V  + +R + NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA + AV+ + + + + A+IL++TF S   +A  ++P
Sbjct:   50 ESVEFTAKDGTRLQGWFI---PSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPER-NFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQGDREGIRAVILDSTFASYATIANQMIP 195          
BLAST of CB610755 vs. ExPASy Swiss-Prot
Match: YFHR_ECOLI (Uncharacterized protein yfhR OS=Escherichia coli (strain K12) GN=yfhR PE=3 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 6.699e-19
Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  175 EDVWLRSSDGVCLHAWFIKLFPDCRGP------TILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLP 603
            E V   + DG  L  WFI   P   GP      TI+    NAGN++    +V  + +R + NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA +  V+ + + + + A+IL++TF S   +A  ++P
Sbjct:   50 ESVEFTAKDGTRLQGWFI---PSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPER-NFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIP 195          
The following BLAST results are available for this feature:
BLAST of CB610755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
BEM46_SCHPO4.618e-3642.23Protein bem46 OS=Schizosaccharomyces pombe GN=bem4... [more]
ABHDD_DANRE7.877e-3642.55Abhydrolase domain-containing protein 13 OS=Danio ... [more]
ABHDD_XENLA1.065e-3240.56Abhydrolase domain-containing protein 13 OS=Xenopu... [more]
ABHDD_CHICK6.900e-3237.63Abhydrolase domain-containing protein 13 OS=Gallus... [more]
ABHDD_HUMAN1.177e-3138.14Abhydrolase domain-containing protein 13 OS=Homo s... [more]
ABHDD_MOUSE2.008e-3138.14Abhydrolase domain-containing protein 13 OS=Mus mu... [more]
YN60_YEAST4.483e-2334.54Uncharacterized membrane protein YNL320W OS=Saccha... [more]
Y2307_MYCTU4.957e-2234.41Uncharacterized protein Rv2307c/MT2364 OS=Mycobact... [more]
YHFR_ECO571.763e-1937.33Uncharacterized protein yfhR OS=Escherichia coli O... [more]
YFHR_ECOLI6.699e-1936.67Uncharacterized protein yfhR OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_C11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610755 ID=CB610755; Name=CB610755; organism=Citrus sinensis; type=EST; length=623bp
GGGGACGGCAGCATGGTGTCGTTCGTGAATGCATTGTTGTACGGAGTGGG
TGGCATAGTGATGGCCGGGATGGCACTGTTGGTGGCTTTCCAAGAGAAGC
TTGTTTACGTTCCGGTTCTGCCGGGTCTGACCAAATCCTACTCGATTACC
CCGTCCCGGCTCCGGCTTATTTACGAGGATGTCTGGCTCCGATCCTCTGA
TGGCGTTTGTCTCCACGCCTGGTTCATCAAGCTTTTTCCCGATTGCCGAG
GTCCAACCATTTTGTTTTTTCAAGAAAATGCTGGCAATATTGCACACCGT
CTTGAAATGGTTCGCATAATGTTACAAAGGTTGCACTGCAATGTATTCAT
GCTTTCATATCGTGGTTATGGAGAAAGTGATGGCTATCCTTCTCAGCATG
GAATTACAAGGGATGCTCAGGCAGCATTGGAGCATCTTTCTCAAAGGACC
GATATAGACACGACTAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGC
CGTTGGAGCTGTGCTTACTAAGAATAATCCGGATAAGGTCGCTGCACTGA
TACTGGAGAATACTTTCACATCGATACTGGACATGGCTGGAGTTCTTCTG
CCATTCCTGAAGTGGTTTATTGG
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