CB610757

Overview
NameCB610757
Unique NameCB610757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            FS+EQI+ LE IFESE T+LEPRKK+QVA ELGLQPRQVAIWFQNKRARWK+KQ+E +Y  LRANY++LAS F
Sbjct:   34 FSEEQIKSLELIFESE-TRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQF 105          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            FSDEQI+ LE +FESE T+LEPRKK+Q+A ELGLQPRQVAIWFQNKRARWKSKQ+E +Y  LR NYD+LAS F
Sbjct:   36 FSDEQIKSLEMMFESE-TRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQF 107          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            F++EQIR LES+F +   KLEPR+K ++A ELGLQPRQVAIWFQNKRARW+SKQ+EHDYA LR+ YD+L S
Sbjct:   77 FTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHS 147          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLAS 333
            F++EQIR LES+F +   KLEPR+K ++A ELGLQPRQVAIWFQNKRARW+SKQ+EHDYA LR+ YD+L S
Sbjct:   77 FTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHS 147          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            F++EQ+R LE+ F +   KLEPR+K ++A ELGLQPRQVAIWFQNKRARW+SKQIEHDYA LRA YD+L
Sbjct:   68 FTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDAL 136          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            F++EQ+R LE+ F +   KLEPR+K ++A ELGLQPRQVAIWFQNKRARW+SKQIEHDYA LRA YD+L
Sbjct:   69 FTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDAL 137          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21
Identity = 49/73 (67.12%), Postives = 63/73 (86.30%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            FS+EQI+ LES+F ++ TKLEPR+K+Q+A ELGLQPRQVAIWFQNKRARWKSKQ+E +Y+ LR +YD+L   +
Sbjct:   34 FSEEQIKSLESMFATQ-TKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSY 105          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21
Identity = 49/73 (67.12%), Postives = 63/73 (86.30%), Query Frame = 1
Query:  121 FSDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGF 339
            FS+EQI+ LES+F ++ TKLEPR+K+Q+A ELGLQPRQVAIWFQNKRARWKSKQ+E +Y+ LR +YD+L   +
Sbjct:   34 FSEEQIKSLESMFATQ-TKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSY 105          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            S EQ+R LE  FE+E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E DYA LR +YD+L
Sbjct:   48 SVEQVRALERSFETEN-KLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDAL 114          
BLAST of CB610757 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  124 SDEQIRLLESIFESESTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSL 327
            S EQ+R LE  FE+E+ KLEP +K ++A +LGLQPRQVA+WFQN+RARWK+KQ+E DYA LR +YD+L
Sbjct:   48 SVEQVRALERSFETEN-KLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDAL 114          
The following BLAST results are available for this feature:
BLAST of CB610757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ATB12_ARATH3.040e-2476.71Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
ATHB7_ARATH3.970e-2476.71Homeobox-leucine zipper protein ATHB-7 OS=Arabidop... [more]
HOX22_ORYSJ2.574e-2370.42Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX22_ORYSI2.574e-2370.42Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX24_ORYSJ5.733e-2371.01Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSI5.733e-2371.01Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX6_ORYSJ1.081e-2167.12Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
HOX6_ORYSI1.081e-2167.12Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]
HOX20_ORYSJ8.567e-1964.71Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
HOX20_ORYSI8.567e-1964.71Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610757 ID=CB610757; Name=CB610757; organism=Citrus sinensis; type=EST; length=707bp
GCGGGGGAGCTCCGATCACAATTTCATAAAATCAAAATGATTGAGAGAAG
AAAAGATGACTCTGCTGCTTCACCAGAAGCAAAAAGGAAGAAGAAGAGCA
AAATGAAGAACAAGAGAAGGTTTAGTGATGAACAAATAAGGTTGCTGGAG
TCCATATTCGAATCAGAGTCCACGAAGCTTGAACCAAGGAAGAAGATGCA
AGTAGCAACGGAGCTAGGGTTGCAGCCTCGCCAGGTAGCTATATGGTTTC
AGAACAAAAGAGCTAGATGGAAATCAAAACAGATTGAGCATGATTATGCT
CAACTCAGAGCCAACTATGATAGTTTGGCATCTGGTTTTGAATCCTTGAT
CAAAGAGAAGGAGTCCCTGCTCTTAGAGTTGCAAATGCTGAATGAACAGC
TGGGAAAATCGGACGATGAAATTAATGGCGTCGGCAAGGACTTGAAAAGA
AGTGATTGGAGCAGTTCAAACAGAGGAAATAATAATGATAATAATGACAA
CAACAGAATCATAGATGATTTTATAGCATCATCTGAAAAATGGTTCAATG
AGGACTCAGGTGGCCTCTTAGACCCGTCCACAAGCAGCAGTTCACAGTCA
CACTGGTTAAACTTCTGGGTTTAAATTGATCGATCACAGTACCTTGGAGA
AGCTAATATACAAATTTATTTCTATCTATTTTGTATTCTATTGCAATATA
TCATGAG
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