CB610758

Overview
NameCB610758
Unique NameCB610758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:228..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.122e-18
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 177
            DCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    9 DCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 180
            DC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    8 DCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 174
            DCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    9 DCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.214e-13
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 174
            DC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    9 DCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.214e-13
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 177
            DCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    9 DCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.325e-11
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 177
            DCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    9 DCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB610758 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.325e-11
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 1
Query:    4 DCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 177
            DCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    9 DCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
The following BLAST results are available for this feature:
BLAST of CB610758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT3_CARPA4.122e-1865.52Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC5.571e-1557.63Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE8.044e-1464.91Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV5.214e-1357.89Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO5.214e-1358.62Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ8.325e-1150.00Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI8.325e-1150.00Metallothionein-like protein 3A OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610758 ID=CB610758; Name=CB610758; organism=Citrus sinensis; type=EST; length=482bp
GGGGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGC
TGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCA
TGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCCACC
TGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACATG
CAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAG
AATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTTTTT
ATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCACCCA
TCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATATGGC
CATGGCCATGACCGTGGCCTTGTGTGGTTTAATTTTAATGTATTATTGTT
AGTCTACAAAAAAAAAAAAAAAAAAAAAAAAA
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