CB610768

Overview
NameCB610768
Unique NameCB610768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig405 contig Csv1_Contig405:1..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB610768 vs. ExPASy Swiss-Prot
Match: SKI31_ARATH (F-box protein SKIP31 OS=Arabidopsis thaliana GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 1 
Query:  520 RIDTGIFSKIPPELFTHILKFLSSEDLVSCSLVCRFLNYAASDESLWRRLYCMRWGLLPPTNNLRVCAWKRSYIQRDK 753
            RI++G+F+ +P ELF HILKFLSSEDLVSCSLVC+FLN+AA+DESLWRRLYC+RWGL  P+  LR  AWK+ YI RD+
Sbjct:   65 RIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLYCIRWGLTLPSRKLRESAWKKLYIDRDE 142
The following BLAST results are available for this feature:
BLAST of CB610768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SKI31_ARATH3.881e-2870.51F-box protein SKIP31 OS=Arabidopsis thaliana GN=SK... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0002_IaF_B10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IaF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610768 ID=CB610768; Name=CB610768; organism=Citrus sinensis; type=EST; length=754bp
GGGGGAGACGTTAGATTTTGTTAAATGCAATCCAAGGGTTGAAACTGACT
CAGAAAATAGTTAGGAAGATATTCGGACTGCACACAGTTAGATAGTTGGG
CCCAACTGGATCGCCGACGCATCTGGACCGTCCCCGTCCGTGTGCATACG
CTTATCTTCGTCTGATCACGCCTCGCTTGCTCCGCTGTAATTTTCACCTC
GTAAAATATTACAAAAACGGCCACAACCCTGCCGCCGCCGTCCGATCCAA
ATCCAGATTCCGCTGCTCCTTTCGTCTCGACGATGACGTTATCCGACGAC
GAAGACGAAAGCTTGGCTCAGTTCCTGGTATCCGAAGTCCTCGCTCAAGT
TTCAGATTCCGAGGAAGAGAAGCAATCCAAGGAAGAAGATGAACCGAAAA
AGAAGAAATTGTGCGTGGAGAAATTCTCAGCCACGGGCTCGTACTCGGGG
TCGGGCTCGGATAGTATTAGTAACAATAATAATTTTAATAATAAAAGTGA
GATTCATTCTAGTCCTAATAGAATTGATACTGGAATTTTCAGCAAGATTC
CGCCTGAATTGTTCACGCACATACTCAAATTCCTGTCTTCTGAGGATCTT
GTATCATGTTCGCTGGTTTGTAGATTCCTGAATTATGCTGCTTCTGATGA
GTCCTTGTGGCGTCGCTTATACTGTATGCGATGGGGTCTGTTGCCCCCAA
CCAACAATTTACGAGTTTGTGCTTGGAAAAGATCTTATATTCAGCGCGAT
AAGG
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