CB610815

Overview
NameCB610815
Unique NameCB610815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:22..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.977e-53
Identity = 97/110 (88.18%), Postives = 100/110 (90.91%), Query Frame = 1
Query:  175 AMSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKYWK 504
            A ST GQVITCKAAVAWE NK + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH IPCYQAEC +CKFCK  K
Sbjct:    2 ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGK 111          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 3.977e-53
Identity = 98/109 (89.91%), Postives = 102/109 (93.58%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKYWK 504
            M+T GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ GDH IPCYQAEC +CKFCK  K
Sbjct:    1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGK 109          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.783e-53
Identity = 97/110 (88.18%), Postives = 101/110 (91.82%), Query Frame = 1
Query:  175 AMSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKYWK 504
            A  T GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVT+VQPGDH IPCYQAEC +CKFCK  K
Sbjct:    2 ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGK 111          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 8.859e-53
Identity = 96/110 (87.27%), Postives = 100/110 (90.91%), Query Frame = 1
Query:  175 AMSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKYWK 504
            A ST GQVITCKAAVAWE N+ + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH IPCYQAEC +CKFCK  K
Sbjct:    2 ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGK 111          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.761e-49
Identity = 90/105 (85.71%), Postives = 96/105 (91.43%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            +T GQVITCKAAVAWEPNK L IEDV+VAPPQA EVRI+ILFTALCHTDAYT  GKDPEGLFPCILGHEAAGIVESVGEGVT+V+PGDH IP YQAEC +CKFCK
Sbjct:    1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCK 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41
Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFC 492
            MST G+VITCKAAVAWE  K LVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPEG+FPCILGHE  GIVES+GEGVT V+ GDH IP Y  EC  CKFC
Sbjct:    1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFC 105          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.767e-38
Identity = 74/106 (69.81%), Postives = 83/106 (78.30%), Query Frame = 1
Query:  178 MSTGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            M T G+VI CKAAVAWEP K L IE+V+VAPP A EVRIK+  T +CHTDAYT SG DPEGLFP ILGHE AG VESVGEGVT+ +PGD  IP Y  +C +CKFCK
Sbjct:    1 METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCK 106          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37
Identity = 74/108 (68.52%), Postives = 85/108 (78.70%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCKYWK 504
            +T G+VITCKAAVAWE  K LVIED++VAPP+A EVRIKI  T +CHTDA+T SG DPEGLFP +LGHE AGIVESVGEGVT  + GDH I  Y  +C +CKFCK  K
Sbjct:    3 ATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGK 110          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.793e-37
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            ST GQVI CKAAVAW     L IE +QVAPP+A EVR+KIL+TA+CHTDAYT  G DPEGLFP +LGHE +GIVESVGEGVT   PGDH +P Y  +C +C++CK
Sbjct:    3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCK 107          
BLAST of CB610815 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.059e-37
Identity = 71/105 (67.62%), Postives = 84/105 (80.00%), Query Frame = 1
Query:  181 STGGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHGIPCYQAECPDCKFCK 495
            +T GQVI CKAAVAWE  K L +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG FP ILGHE AG+VESVGEGVT+ + GD  IP Y  +C +CKFCK
Sbjct:    1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCK 105          
The following BLAST results are available for this feature:
BLAST of CB610815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
ADHX_ORYSI3.977e-5388.18Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH3.977e-5389.91Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_MAIZE6.783e-5388.18Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ORYSJ8.859e-5387.27Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA7.761e-4985.71Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_DICDI2.047e-4173.33Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_SPAAU2.767e-3869.81Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DROME1.051e-3768.52Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_CAEEL1.793e-3766.67Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHH_GADMO3.059e-3767.62Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_C02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610815 ID=CB610815; Name=CB610815; organism=Citrus sinensis; type=EST; length=538bp
GGGGGGTGTGTTTGGCAGATTCAATAATAGAGGGAGCTACTTTAGAGATC
NCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGTCCCTTTT
GAATAATAATATCTAACTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTT
TCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGGAGGTCAAGTCAT
CACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTG
AGGATGTGCAGGTTGCTCCGCCACAGGCTGGCGAGGTCCGAATCAAGATT
CTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGA
TCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCTGGGATTG
TGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGGC
ATCCCTTGTTACCAGGCAGAATGCCCAGATTGCAAGTTTTGCAAGTACTG
GAAAGACTAACCTCTAGGGGTAAGGTTAGNGGTGCCAC
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