CB611059

Overview
NameCB611059
Unique NameCB611059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2579 contig Csv1_Contig2579:401..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MSDTCGNCDCAD++QCVKKGSSY AD +ET  S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.773e-19
Identity = 39/64 (60.94%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  103 TCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 294
            TCGNCDC D+SQCVKKG+SY  D VET  S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 288
            MSD CGNCDCAD SQCVKKG+S   D VET+ S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.053e-16
Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 288
            MS  C NCDC+D SQC KKG S+    VET    + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.053e-16
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MS  C NCDCAD +QCVKKG+SY    VET    + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MSD CGNCDCAD+SQCVKKG+SY    VE   S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MSD CGNCDCAD+SQCVKKG+SY    VE   S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MSD CGNCDCAD+SQCVKKG+SY    V+   S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CB611059 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.734e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   94 MSDTCGNCDCADRSQCVKKGSSYAADFVETNLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 291
            MSD CG+CDCAD+SQCVKKG+SY    V+   S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CB611059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.328e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC5.773e-1960.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.680e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.053e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO2.053e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ7.803e-1654.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI7.803e-1654.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.246e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI4.734e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_G10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611059 ID=CB611059; Name=CB611059; organism=Citrus sinensis; type=EST; length=407bp
NCGGCCGGGGATCACAGCAAAGCAGATCAAGTTTCGTACAATAAAGAGCC
CTCTATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGG
ACACCTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAG
GGAAGCAGCTATGCTGCTGACTTCGTCGAGACTAACTTGAGCTTTGTCAG
CACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCA
AGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAA
TAAACAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATA
TTGTGGGGGTTAAGAATAATGTAAGGCGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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