CB611069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 1.774e-93 Identity = 152/178 (85.39%), Postives = 162/178 (91.01%), Query Frame = 3 Query: 96 ISTGRTSSKKRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIA 629 I G +KRSEIYTYE+PWHIYAMNWSVRRDK YRLAI SLL QYPNRVEIVQLD+S GEIR+DPNLSFEHPYPPTKTIFIPDKECQ+PDLLATS DFLR+WRI+D+ RVELKS LN NKNSE+CGPLTSFDWNEAEPRRIGTSS DTTCTIWDIEREAVDTQLIAHDKEV+DIA Sbjct: 8 IQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIA 185 HSP 2 Score: 39.2762 bits (90), Expect = 1.774e-93 Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYEISE 735 RVFDLRDKEHSTIIYE SE Sbjct: 202 RVFDLRDKEHSTIIYESSE 220
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.543e-89 Identity = 145/179 (81.01%), Postives = 159/179 (88.83%), Query Frame = 3 Query: 93 RISTGRTSSKKRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIA 629 +I G KRSEIYTYE+PW IYAMNWS+RRDK YRLAI SL+ QYPNRVEIVQLD+S GEIR+DPNL FEHPYPPTKT FIPDKECQ+PDLLATS DFLR+WRISD++ RVELKS L+ +KNSE+ GP+TSFDWNEAEPRRIGTSSIDTTCTIWDIERE VDTQLIAHDKEVYDIA Sbjct: 7 QIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIA 185 HSP 2 Score: 37.7354 bits (86), Expect = 2.543e-89 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYEISE 735 RVFDLRDKEHSTIIYE E Sbjct: 202 RVFDLRDKEHSTIIYESGE 220
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.079e-56 Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 3 Query: 123 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREA-----------VDTQLIAHDKEVYDIA 629 KR EIY YE+PW +YAMNWSVR DK +RLA+ S + +Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATSGD+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDTTCTIW +E V TQLIAHDKEVYDIA Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLEC--LLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA 181 HSP 2 Score: 30.0314 bits (66), Expect = 7.079e-56 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 R+FDLR EHSTIIYE Sbjct: 202 RMFDLRHLEHSTIIYE 217
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.079e-56 Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 3 Query: 123 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREA-----------VDTQLIAHDKEVYDIA 629 KR EIY YE+PW +YAMNWSVR DK +RLA+ S + +Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATSGD+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDTTCTIW +E V TQLIAHDKEVYDIA Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLEC--LLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA 181 HSP 2 Score: 30.0314 bits (66), Expect = 7.079e-56 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 R+FDLR EHSTIIYE Sbjct: 202 RMFDLRHLEHSTIIYE 217
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.700e-55 Identity = 97/175 (55.43%), Postives = 127/175 (72.57%), Query Frame = 3 Query: 117 SKKRSEI-YTYESPWHIYAMNWS-VRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPD--KECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIA 629 S RSE TY+SP+ +YAM +S +R +R+A+ S L Y NR++I+ D + ++ PNLSFEHPYPPTK +F P + DLLA+SGDFLR+W I+++ VE S+LN +K SE+C PLTSFDWN+ EP+R+GT SIDTTCTIWDIE+ V+TQLIAHDKEV+DIA Sbjct: 8 SLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIA 182 HSP 2 Score: 36.1946 bits (82), Expect = 7.700e-55 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 R+FDLRDKEHSTIIYE Sbjct: 199 RIFDLRDKEHSTIIYE 214
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.707e-54 Identity = 94/169 (55.62%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 123 KRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIA 629 ++ IYTY SPW IY ++WS R ++ +RLAI S L Y NRV+++QL++ T + FEHPYPPTK ++IPDK +PDLLAT+GD+LR+W + R ++LKSLL N SE+C PL+SFDWNE +P + TSSIDTTCTIW+IE TQLIAHDKEV+DIA Sbjct: 2 EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVV--CGFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIA 167 HSP 2 Score: 30.8018 bits (68), Expect = 1.707e-54 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 R+FDLR+ EHSTIIYE Sbjct: 185 RMFDLRNLEHSTIIYE 200
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.853e-22 Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 144 YESPWHIYAMNWSVR-RDKNYRLAIASLLGQYPNRVEIVQL---DDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPD--LLATSGDFLRVWRISDE---DRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIA 629 Y +PW +A++W + + + +A+ SL + N +++++L DD + + + YP TK ++ P D LLA++ LR+W+ E D + ++ L+ + + PLTSFDW + +P I SS+DTTCT+WDI + TQLIAHDKEVYD+A Sbjct: 47 YNAPWIPFALDWLKQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEK-AQAATDLEYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVA 216 HSP 2 Score: 29.261 bits (64), Expect = 1.853e-22 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 R+FDLR +HSTIIYE Sbjct: 235 RMFDLRSLDHSTIIYE 250
BLAST of CB611069 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.842e-18 Identity = 54/183 (29.51%), Postives = 96/183 (52.46%), Query Frame = 3 Query: 129 SEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLGQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRVWRISDEDRRVELK---SLLNGNK----------NSEYCG---PLTSFDWNEAEPRRIGTSSIDTTCTIWDIE-REAVDTQLIAHDKEVYDI 626 + + Y+S + ++ ++WS + + + S N+++++ +D + + + + YP +K ++P + P LAT D LR+W +S E+R+ + + SL N+ + + G P+TSFDWN + I +SSIDTTC +WD++ V TQLIAHD EV+D+ Sbjct: 120 ASVCEYQSHYPLFGLDWSA----DDYVCLGSYKEDSRNKLQVLHSNDL---LSWESVVDADVVYPVSKIQWVPSQ--LYPRKLATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDV 293 HSP 2 Score: 29.261 bits (64), Expect = 8.842e-18 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 679 RVFDLRDKEHSTIIYE 726 RVFDLR HSTIIYE Sbjct: 313 RVFDLRSLAHSTIIYE 328 The following BLAST results are available for this feature:
BLAST of CB611069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611069 ID=CB611069; Name=CB611069; organism=Citrus sinensis; type=EST; length=735bpback to top |