CB611103

Overview
NameCB611103
Unique NameCB611103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9308 contig Csv1_Contig9308:141..943. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB611103 vs. ExPASy Swiss-Prot
Match: ANAG_HUMAN (Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGLU PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25
Identity = 73/240 (30.42%), Postives = 119/240 (49.58%), Query Frame = 1 
Query:    7 WEILYHTVYNCT-DGIADHNTDFIVKFPDWDPSLHSGSAISKRDQMHALHVLPGPRRFLSEENSDMPQAHLWYSNQELIKGLKLFLNAGNALAGSATYRYDLVDITRQALSKLANQVYMDAVIAFQHKD-ASAFNIHSQKFLQLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTMWYDTNITTQSKLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQ 720
            W +L  +VYNC+ +    HN   +V+     PSL   ++I                               WY+  ++ +  +L L +  +LA S  +RYDL+D+TRQA+ +L +  Y +A  A+  K+ AS          +L+  +DE+LAS+  FLLG+WLE A+  A + +E   YE N+R Q+T+W       +  + DYANK  +GL+ +YY PR   + + +  S+ +   FQ
Sbjct:  494 WRLLLRSVYNCSGEACRGHNRSPLVR----RPSLQMNTSI-------------------------------WYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLW-----GPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQGIPFQ 693
The following BLAST results are available for this feature:
BLAST of CB611103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANAG_HUMAN7.568e-2530.42Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=N... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_B05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611103 ID=CB611103; Name=CB611103; organism=Citrus sinensis; type=EST; length=803bp
GGGACTTGGGAAATTCTTTATCACACGGTTTACAATTGCACGGATGGAAT
TGCTGACCACAACACAGATTTCATTGTTAAATTTCCAGATTGGGATCCAT
CACTACATTCTGGATCTGCCATATCAAAACGAGACCAGATGCATGCACTC
CACGTCTTACCAGGACCCAGAAGATTCTTATCTGAAGAAAACTCTGACAT
GCCTCAGGCACATTTATGGTATTCTAATCAGGAGTTAATCAAGGGTTTAA
AACTATTCTTGAATGCTGGTAATGCTCTAGCTGGAAGCGCCACATATAGA
TATGACTTGGTTGACATAACAAGGCAGGCACTGTCAAAGCTAGCAAACCA
AGTATACATGGATGCAGTGATTGCTTTTCAGCATAAGGATGCCAGTGCTT
TTAATATTCATAGCCAAAAGTTTCTTCAGCTCATAAAGGATATTGATGAG
CTACTTGCTTCCAATGACAATTTTCTCCTTGGAACATGGCTTGAAAGTGC
AAAAAAATTGGCGACAAATCCTAGTGAAATGATTCAGTACGAGTACAACG
CAAGGACACAAGTGACAATGTGGTATGACACCAACATTACTACACAGAGC
AAGCTTCATGATTACGCAAACAAATTCTGGAGTGGATTATTAGTAGACTA
CTATCTTCCCCGAGCTTCTACGTATTTCGATTATATGTCTAAAAGCTTGA
GAGAGAAATCTGAATTCCAGGTGGACAGATGGAGGCAACAATGGGTCTTT
ATTTCAATCAGTTGGGCAATCAAATTGGAAAACAGGTACCAAAAATTACC
CAA
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