CB611105

Overview
NameCB611105
Unique NameCB611105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2192 contig Csv1_Contig2192:57..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CB611105 vs. ExPASy Swiss-Prot
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.739e-20
Identity = 63/142 (44.37%), Postives = 73/142 (51.41%), Query Frame = 3 
Query:  234 QKRRWGSCWSLYWCFGSHKTSKRISHAVLLPE------PMVXXXXXXXXXXXXXXXXIVLPFIXXXXXXXXFLQSDPSSATQSPAGLLCLNSLSVNAYSPGGPAS-MFAIGPYAHETQLVTPPVFSAFTPEPSTALCTPPPE 638
            Q++RWG C  ++ CF S K  KRI  A  +PE                         I L  +        F  S   S TQSP    C  SL+ N  SPGGP+S M+A GPYAHETQLV+PPVFS FT EPSTA  TPPPE
Sbjct:    7 QRKRWGGCLGVFSCFKSQKGGKRIVPASRIPEGGNVSASQPNGAHQAGVLNNQAAGGINLSLLAPPSSPASFTNSALPSTTQSPN---CYLSLAAN--SPGGPSSSMYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPE 143
The following BLAST results are available for this feature:
BLAST of CB611105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1666_ARATH3.739e-2044.37Uncharacterized protein At1g76660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_B08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611105 ID=CB611105; Name=CB611105; organism=Citrus sinensis; type=EST; length=638bp
GGGGGCTCTTCGTTTCCTTACCAAATCTTTGAAATACTTGAAAAAGCGGA
AANNTTTCCTTTGGAGATCCAAACGGAAGCTGTAGATGTTATTACACAAC
TCGTTTGTGCCGTCGTTTCATGTTTTGAAAATTTGAAAACAAGATGAGTA
GTGTTCACGACAGCGTCGAGACCGTTAACGCCGCTGCAACTGCCATAGTT
TCAGCTGAGTCCCGCCTCCGGCCAGCCGCGATTCAGAAAAGAAGATGGGG
AAGCTGTTGGAGCCTCTACTGGTGTTTTGGATCTCATAAAACTAGCAAGC
GGATTAGCCATGCTGTCCTTCTTCCTGAACCAATGGTAACAGGAGCCGCA
GCCCCAGCTGCAAAAACTCAAGCCCACTCAACAGCCATTGTACTTCCCTT
CATTGCTCCTCCCTCTTCTCCTGCATCGTTCCTCCAATCAGACCCTTCAT
CTGCCACCCAATCACCTGCTGGATTGCTTTGCCTCAATTCCCTTTCTGTC
AACGCCTATTCTCCTGGTGGACCTGCATCCATGTTTGCCATAGGCCCATA
TGCTCACGAAACACAGTTAGTTACACCACCTGTGTTTTCTGCCTTCACCC
CTGAACCATCTACTGCCCTTTGCACCCCCCCTCCCGAA
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