CB611111

Overview
NameCB611111
Unique NameCB611111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:1042..1896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.887e-71
Identity = 126/201 (62.69%), Postives = 156/201 (77.61%), Query Frame = 3
Query:    6 AIGGDGVVSAECKLVVSHYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS---AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            AIG  GVVS +CK VV+ YG  I DLL+S   P+K+C QI LC F+G   VS GI++VV++    + DS    +CS CEM VVW+QNQL+Q QTKE++++YINELCD +P+PMG+S +DC ++ +MP VSFTIG KIF+L+PE+YILK GEG    CISGF AFD+PPPRGPLWILGDVFMG YHTVFD GKLR+G AEAA
Sbjct:  313 AIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.450e-69
Identity = 121/198 (61.11%), Postives = 158/198 (79.80%), Query Frame = 3
Query:    6 AIGGDGVVSAECKLVVSHYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            AIG +G++S ECK VVS YG++I +LL++   P+KVC Q+GLC F+G   VS GI++VV+KEN+  G  A+CS CEMAVVW++NQL++ +TKE +L+Y N+LC+ LP+P GES + C +I  MPN++FTI +K F L+PEQYI+K  +G   VCISGFMAFD+PPPRGPLWILGDVFMG YHTVFD GK RIGFA++A
Sbjct:  301 AIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENL--GSDAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 7.196e-69
Identity = 125/205 (60.98%), Postives = 154/205 (75.12%), Query Frame = 3
Query:    3 DAIGGDGVVSAECKLVVSHYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS------AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            + IG  GVVS ECK VVS YG  I DLL++   P K+C Q+GLC F+G   VS GIK+VV+ E   AG+S       +C+ACEMAVVW+QNQL Q +T++ +L+YIN+LCD LP+PMGES +DC  + +MP +SFTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD GK+R+GFA++A
Sbjct:  308 EKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDE---AGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.094e-68
Identity = 122/202 (60.40%), Postives = 152/202 (75.25%), Query Frame = 3
Query:    3 DAIGGDGVVSAECKLVVSHYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD---SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            + IG  GVVS ECK +VS YG  I DLL++   P+K+C Q+GLC F+G   VS GI++VV+ E V +       +CSACEMAVVW+QNQL Q +T++ +L Y+N+LC+ LP+PMGES +DC  + +MP++ FTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD GKLRIGFA+AA
Sbjct:  307 EKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 5.523e-61
Identity = 108/199 (54.27%), Postives = 147/199 (73.87%), Query Frame = 3
Query:    6 AIGGDGVVSAECKLVVSHYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEK-ENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            AIG  GV+S +CK +V  YG  + ++L+S   PEK+C Q+ LC+F+G+   S  I++VV+K +  S+G    C  C   VVW+QNQ++Q +T+E +++Y+++LC+ LP+PMGES +DC  + +MPN++FT+G K FNLSPEQY+LK GEG    CISGF A D+ PP GPLWILGDVFMG YHTVFD G LR+GFAEAA
Sbjct:  275 AIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.377e-25
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 3
Query:  318 SLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            ++P   GE +IDC ++PT+P +SF +G K ++L+ EQY+LK  +G   +C+SG M  ++PPP GPLWILGDVF+G Y+TVFD    R+GFA++
Sbjct:  303 AIPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESNRVGFAKS 395          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24
Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  180 VEKENVSAGDS-AVCSA-CEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            +  ++++ GD  ++C+  CE  V    + +     + K L    +   + P   GE +++CD +P++P +SFT+G +++ L+ EQYILK  +    +C+SGFM  D+P P GPLWILGDVFMG Y+TVFD    R+GFA+A
Sbjct:  258 IRVDSMAVGDQLSLCTGGCEAIVDSGTSLITGPSVEVKALQ---KAIGAFPLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFDRDANRVGFAKA 395          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24
Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 3
Query:  189 ENVSAGDSAVCS-ACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            ++V  GD+  C+  CE A+      L      E  ++ IN+     P   GE ++DC  IP +P +SF +G K F+L    Y+L+  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+T FD G  R+GFA A
Sbjct:  253 DSVKVGDTEFCNNGCE-AIADTGTSLIAGPVSE--VTAINKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  180 VEKENVSAGDS-AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            +    V+ G S  +C     A+V     L   Q +E  +  + +   ++P   GE +I C+++P++P+V+ T+G K + LS E Y LK  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+G AEAA
Sbjct:  207 IHMNQVAVGSSLTLCKGGCEAIVDTGTSLIVGQPEE--VRELGKAIGAVPLIQGEYMIPCEKVPSLPDVTVTLGGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRYYTVFDRDLNRVGLAEAA 345          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.052e-23
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 3
Query:  318 SLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            ++P   GE +I C+++ T+P ++  +G K + LSPE Y LK  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+GFAEAA
Sbjct:  317 AVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
The following BLAST results are available for this feature:
BLAST of CB611111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
ASPR_CUCPE5.887e-7162.69Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPRX_ORYSJ1.450e-6961.11Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR1_ORYSJ7.196e-6960.98Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU2.094e-6860.40Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA5.523e-6154.27Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CATD_CLUHA6.377e-2550.54Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_CHIHA2.423e-2439.72Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
ASPP_AEDAE4.134e-2441.61Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_PIG1.203e-2340.43Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CATD_HUMAN2.052e-2351.06Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611111 ID=CB611111; Name=CB611111; organism=Citrus sinensis; type=EST; length=855bp
GGGATGCCATTGGTGGCGATGGAGTTGTTAGTGCAGAGTGTAAGCTAGTT
GTTTCCCACTACGGGGATTTAATATGGGATCTTTTAGTATCAGGGCTACT
ACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGCTG
AATATGTGAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTATCA
GCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAATGGCCGTGGTTTGGGT
CCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTATA
TAAATGAGCTCTGCGACAGCCTGCCAAATCCGATGGGCGAATCAATTATT
GACTGTGATCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGAGA
CAAAATTTTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGAAG
GGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTCCT
CCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTTTATCA
CACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCTTTGCTGAGGCTGCGT
AATGATCTACTTACTGTCAAGTTTTTATGTAGTAGCAGCGATCATCACCT
GCTCATATGAGGAGGAGGGTTCTAGAATGTAGATTATGGTTTTCATGTAC
TGTAAAACGATCAGTATGCTTTTATGCATAACTATCTTCATCATCACCAC
AGATGATATGCTGATATATACTTATGTAAAATCCTATCATCCTATGTTTA
AAGTGATTTAATTTTATGATATTCTGACGGATAAAAGATAAAAAAAAAAA
AAAAA
back to top