CB611112 | Citrus Genome Database

Overview


Name	CB611112
Unique Name	CB611112
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	757

Libraries


Library Name	Type
Mature Albedo	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CB611112_ssr5	microsatellite	CB611112_ssr5:5..16.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582	contig	Csv1_Contig1582:35..791.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 388.652 bits (997), Expect = 1.895e-107
Identity = 195/225 (86.67%), Postives = 208/225 (92.44%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VYLARLAEQAERYD+MVEAMK +AK+DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KG+EQNVKRIK YRQRV+DEL KIC+DILSVIDEHL+PSST+GESTVFYYKMKGDYYRYLAEFK  DDRKEA++ SLK          S+L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESYKDSTLIMQLLRDNLTLWT
Sbjct:    9 VYLARLAEQAERYDEMVEAMKAIAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGHEQNVKRIKTYRQRVEDELTKICSDILSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWT 233

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 5.342e-102
Identity = 190/225 (84.44%), Postives = 202/225 (89.78%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VYLARLAEQAERYD+MVEAMK VAK+DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KG++QNVKRIK Y+QRV+DEL K     LSVIDEH++PSSTSGESTVFYYKMKGDYYRYLAEFK  DDRKEAAD SLK          ++L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESYKDSTLIMQLLRDN TLWT
Sbjct:    9 VYLARLAEQAERYDEMVEAMKTVAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGHDQNVKRIKTYQQRVEDELTKYALT-LSVIDEHVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWT 232

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 5.342e-102
Identity = 182/225 (80.89%), Postives = 203/225 (90.22%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+A+LAEQAERY++MVE+MK VA LDVELTVEERNL+SVGYKNVIGARRASWRILSSIEQKEE KGNE N KRIKEYRQ+V+ EL+ ICND++ VIDEHLIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEAAD S+K          ++LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWT
Sbjct:   11 VYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWT 235

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.906e-101
Identity = 184/225 (81.78%), Postives = 203/225 (90.22%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VYLA+L EQAERYD+MVEAMKKVA LDVELT+EERNL+SVGYKNVIGARRASWRILSSIEQKEE+KGNEQN KRIK+YR +V++EL+KIC DIL+VID+HL+P +TSGESTVFYYKMKGDY+RYLAEFK   DR+EAAD SLK          +EL  THPIRLGLALNFSVFYYEILNSPERACHLAK+AFDEAIAELDSLNE+SYKDSTLIMQLLRDNLTLWT
Sbjct:    9 VYLAKLNEQAERYDEMVEAMKKVAALDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWT 233

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.007e-100
Identity = 183/225 (81.33%), Postives = 202/225 (89.78%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VYLA+L+EQ ERYD+MVEAMKKVA+LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KGN++NVKR+K YR+RV+DELAK+CNDILSVID+HLIPSS + ESTVF+YKMKGDYYRYLAEF    +RKEAAD SL+          + L PTHP+RLGLALNFSVFYYEILNSPE AC LAKQAFD+AIAELDSLNEESYKDSTLIMQLLRDNLTLWT
Sbjct:    9 VYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 233

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 3.828e-100
Identity = 179/225 (79.56%), Postives = 202/225 (89.78%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+A+LAEQAERYD+MVEAMK VA +DVELTVEERNL+SVGYKNV+G+RRASWRILSSIEQKEE++GNEQNVKRIKEY Q+V+ EL  ICNDI+ VID+HLIPS ++GESTVFY+KMKGDYYRYLAEFK  +D+KE A+ SLK          +EL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELDSLNE+SYKDSTLIMQLLRDNLTLWT
Sbjct:   11 VYVAKLAEQAERYDEMVEAMKNVANMDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWT 235

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 5.000e-100
Identity = 179/225 (79.56%), Postives = 203/225 (90.22%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+A+L+EQAERYD+MVE MKKVA+++ ELTVEERNL+SVGYKNVIGARRASWRI+SSIEQKEE+KGNE NVK+IK YRQ+V+DELA IC DIL++ID+HLIP +TSGE+TVFYYKMKGDYYRYLAEFK   +RKEAA+ SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWT
Sbjct:   14 VYMAKLSEQAERYDEMVETMKKVARVNSELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 238

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.114e-99
Identity = 177/225 (78.67%), Postives = 201/225 (89.33%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+A+LAEQAERY++MV++MK VA LDVELT+EERNL+SVGYKNVIGARRASWRILSSIEQKEE+KGN+ N KRIKEYR +V+ EL+ IC D++ VIDEHLIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEA D S+K          +ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWT
Sbjct:   11 VYIAKLAEQAERYEEMVDSMKNVANLDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWT 235

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.481e-99
Identity = 179/225 (79.56%), Postives = 204/225 (90.67%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+A+LAEQAERY++MVEAMK VA L+VELTVEERNL+SVGYKNV+GARRASWRILSSIEQKEEAKGN+ +VKRIKEYR +V+ EL+ IC+DI++VIDE+LIPSS+SGE +VF+YKMKGDYYRYLAEFK  D+RKEAADHS+K          +EL  THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWT
Sbjct:   11 VYVAKLAEQAERYEEMVEAMKNVANLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWT 235

[Close]

BLAST of CB611112 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 359.762 bits (922), Expect = 9.429e-99
Identity = 177/225 (78.67%), Postives = 200/225 (88.89%), Query Frame = 2

Query:   83 VYLARLAEQAERYDKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVDDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWT 757
            VY+ARLAEQAERYD+MV+AMK VA LDVELTVEERNL+SVGYKNV+G+RRASWRILSSIEQKE+A+GNEQNVKRI+ YRQ+V+ EL  ICN+I++VIDEHLIPS T+GESTVFYYKMKGDYYRYLAEFK  DD+KE +D SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERAC LAKQ FDEAI+ELDSLNE++YKD TLI+QLLRDNLTLWT
Sbjct:   11 VYIARLAEQAERYDEMVDAMKNVANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWT 235

The following BLAST results are available for this feature:

BLAST of CB611112 vs. ExPASy Swiss-Prot

BLAST of CB611112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
14337_SOLLC	1.895e-107	86.67	14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P...	[more]
1433_TOBAC	5.342e-102	84.44	14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1	[more]
1433D_SOYBN	5.342e-102	80.89	14-3-3-like protein D OS=Glycine max GN=GF14D PE=2...	[more]
14311_ARATH	5.906e-101	81.78	14-3-3-like protein GF14 omicron OS=Arabidopsis th...	[more]
14310_ARATH	1.007e-100	81.33	14-3-3-like protein GF14 epsilon OS=Arabidopsis th...	[more]
14339_SOLLC	3.828e-100	79.56	14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P...	[more]
14312_ARATH	5.000e-100	79.56	14-3-3-like protein GF14 iota OS=Arabidopsis thali...	[more]
1433B_VICFA	1.114e-99	78.67	14-3-3-like protein B OS=Vicia faba PE=2 SV=1	[more]
1433C_SOYBN	2.481e-99	79.56	14-3-3-like protein C OS=Glycine max GN=GF14C PE=2...	[more]
14338_SOLLC	9.429e-99	78.67	14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P...	[more]

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Properties


Property Name	Value
Genbank description	ALBEDO0001_IIaF_H09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_H09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB611112 ID=CB611112; Name=CB611112; organism=Citrus sinensis; type=EST; length=757bp
GGGGGAGAGAGAGAGACGGTAGAGAGCTAGCGAGAGAAAGAGTGAGTGAC
GATCNGAAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTT
GCTGAGCAAGCCGAGAGATACGACAAGATGGTTGAAGCCATGAAGAAAGT
TGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTG
TTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTG
TCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAA
GAGGATTAAGGAATATAGGCAGAGGGTTGATGATGAGCTTGCAAAGATCT
GTAATGATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACA
TCTGGAGAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCG
TTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATC
ATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTA
CCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTT
CTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAAC
AAGCATTTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCC
TACAAGGACAGCACCCTTATTATGCAGCTTCTTCGGGATAATCTCACCTT
GTGGACC