CB611143

Overview
NameCB611143
Unique NameCB611143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13133 contig Csv1_Contig13133:44..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.921e-64
Identity = 121/146 (82.88%), Postives = 129/146 (88.36%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD            SGFSL++PNTFGNRIHRMLKLGLSI+E++GDADADMP LED   DAEGSKMEEVD
Sbjct:  554 VEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.019e-61
Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD            SGFSLD+PNTFG+RIHRMLKLGLSI ++DA +ADA+MPPLED A DAEGSKMEEVD
Sbjct:  554 VEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLEDDA-DAEGSKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD            SGFSLD+PNTFG+RIHRMLKLGLSI ++D  +ADADMPPLED A DAEGSKMEEVD
Sbjct:  554 VEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDVVEADADMPPLEDDA-DAEGSKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.135e-59
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD            SGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  556 VEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.135e-59
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD            SGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  556 VEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 2.529e-59
Identity = 119/147 (80.95%), Postives = 126/147 (85.71%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD            SGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  556 VEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.529e-59
Identity = 119/147 (80.95%), Postives = 126/147 (85.71%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD            SGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  556 VEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.418e-56
Identity = 112/146 (76.71%), Postives = 121/146 (82.88%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD            SGFSLDDPNTFG RIHRMLKLGLSI+E+    DADMP LE+ A   E SKMEEVD
Sbjct:  560 VEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEEEAGDDADMPALEEEA--GEESKMEEVD 703          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.299e-55
Identity = 112/147 (76.19%), Postives = 123/147 (83.67%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+AD+NDKSVKD            SGFSLDDPNTF  RIHRMLKLGL+I+ED A D DADMP L++ A  AE SKMEEVD
Sbjct:  571 VEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNIDEDAAADEDADMPALDEGA--AEESKMEEVD 715          
BLAST of CB611143 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 2.215e-55
Identity = 112/147 (76.19%), Postives = 122/147 (82.99%), Query Frame = 2
Query:    5 VEKVLVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXXSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPPLEDAADDAEGSKMEEVD 442
            VEKV+VSDR+VDSPCCLVTGEYGWTANMERIMKAQALRD+SM+GYMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD            SGFSLD+PNTF  RIHRMLKLGLSI+ED   + D DMP LE+  D AE SKMEEVD
Sbjct:  556 VEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGLSIDEDENVEEDGDMPELEE--DAAEESKMEEVD 700          
The following BLAST results are available for this feature:
BLAST of CB611143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
HSP80_SOLLC9.921e-6482.88Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_ARATH6.019e-6182.31Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH1.751e-6081.63Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP81_ORYSJ1.135e-5981.63Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.135e-5981.63Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.529e-5980.95Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.529e-5980.95Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_IPONI3.418e-5676.71Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE1.299e-5576.19Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP81_ARATH2.215e-5576.19Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_D06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611143 ID=CB611143; Name=CB611143; organism=Citrus sinensis; type=EST; length=658bp
GGGGGTCGAGAAGGTTCTGGTGTCTGACCGTGTTGTTGACTCACCCTGCT
GTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAGAGGATCATG
AAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAA
GAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTGAGGA
AGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGCCCTT
CTGCTCTTTGAGACTGCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCC
TAACACTTTCGGCAACAGAATCCACAGGATGTTGAAACTCGGGCTGAGCA
TCGAGGAGGATGCTGGTGATGCTGATGCTGACATGCCACCATTGGAGGAT
GCTGCTGACGATGCTGAGGGCAGCAAGATGGAGGAAGTTGATTAAGAAGC
TATAATAGTCTGATATACTAGTCTTTTTTCATGAAACTCTTTTAACTAGG
TAGTTTCTTTTTGTTATGCGTTCTGTGGTGGTAGTACTGTGGGATTAGTG
CTTTTATATTTTTATTTTCTCTCTTTGGTGGAGGTTTTGTTTTATTGTTT
TGCAAATGCTTAAAAAGTATGCTGTTTACAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
back to top