CB611182

Overview
NameCB611182
Unique NameCB611182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4843 contig Csv1_Contig4843:1..322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36
Identity = 72/82 (87.80%), Postives = 77/82 (93.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDLI KHSEFIS P SLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLW 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36
Identity = 72/82 (87.80%), Postives = 77/82 (93.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDLI KHSEFIS P SLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLW 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36
Identity = 72/83 (86.75%), Postives = 77/83 (92.77%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQLEYLEERRLKDLI KHSEFIS P SLW+
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWV 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 2.345e-36
Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDL+ KHSEFIS P SLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.345e-36
Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+DQLEYLEERRLKDL+ KHSEFIS P SLW
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.062e-36
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQLEYLEERRLKDL+ KHSEFIS P SLWI
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWI 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 8.910e-36
Identity = 69/83 (83.13%), Postives = 77/83 (92.77%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLWI 250
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKEDQ+EY+EERRLKDL+ KHSEFIS P SLWI
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWI 210          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 1.520e-35
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRD  GEPLGRGTKITL LK+DQLEYLEERRLKDL+ KHSEFIS P  LW
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 209          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.776e-35
Identity = 71/82 (86.59%), Postives = 73/82 (89.02%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVAEKVIVT KHNDDEQYIWESQAGGSFTVTRD  GE LGRGTKITL LKEDQLEYLEERR+KDL+ KHSEFIS P  LW
Sbjct:  133 AYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLW 214          
BLAST of CB611182 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.340e-34
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFISNPRSLW 247
            AYLVA++V+VT KHNDDEQY+WESQAGGSFTVT DT+GE LGRGTKITL LK+DQLEYLEERRLKDL+ KHSEFIS P  LW
Sbjct:  139 AYLVADRVMVTTKHNDDEQYVWESQAGGSFTVTHDTTGEQLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 220          
The following BLAST results are available for this feature:
BLAST of CB611182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HSP81_ORYSJ1.795e-3687.80Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.795e-3687.80Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP80_SOLLC1.795e-3686.75Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_ORYSJ2.345e-3686.59Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.345e-3686.59Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP82_ARATH3.062e-3685.54Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH8.910e-3683.13Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP81_ARATH1.520e-3585.37Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI5.776e-3586.59Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE8.340e-3481.71Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611182 ID=CB611182; Name=CB611182; organism=Citrus sinensis; type=EST; length=322bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAATAAGCACTCTGAGTTCATTAGTAACCCAAGATCCCTCTGGATT
GAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGACGACGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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