CF417100 | Citrus Genome Database

Overview


Name	CF417100
Unique Name	CF417100
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	681

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CF417100_ssr178	microsatellite	CF417100_ssr178:178..187.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7484	contig	Csv1_Contig7484:818..1497.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	USDA-FP_115000-030 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_C10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417100 ID=CF417100; Name=CF417100; organism=Citrus sinensis; type=EST; length=681bp
CCTGGGCTGCAGGGATGATATTTATACTGGAACAGCTCCTATTAGAGATG
ATATTGGTCCTGATAGGAGTAGGTTTAGGAGATATCCAGAAGGCATCAGT
AGAGGCTTCAGGGAGGACTATCGCAGGCCAATGCCCAACTATCCTGCTGA
TGATCATATGCCACACCGGATAGCCAGGAGAGAGAGAAGTATTTCTCCAC
TTGGTGGGGAGAGACCCCATTATGCTCAACCTTATAAGAAACCCAGGTCG
AGATCCAGAAGCCGGTCGCCTAGTTCATGGTTTTCAATGAGGGATCGAAA
TGAGGGGTCCAGACGCCGCAGCAGGTCGCCAGATTTTAGGTCTACCAGAA
TAAATAGGGTGAGGGCGCCTTTTAAGAAGCGTTTTGAAGTTGAATACGAA
GAAGGGTTCATGTCCCCACCAAGAAAATCGGATGTCGCCACAGCGCAATC
CTCCCAGGTTTGATGACCGGATCTCTGGTTTAGATAATTTCAGGGATAGG
AAATCACCGGTTAGGATGTTCCGTCAGAGCCAAAGGTTTGATTCATCACG
TCCCTTTAGACCCATGATACCTCCCAGAAGATTTCCAGATATGGGCAGTG
GTGCTGGTAGGGGGATATAAGTATGAAGGTACTGATCTTGATGATAGAAG
AAAGCCGGGGAACCGATATGAGGTTATTCAT