CF417130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.531e-61 Identity = 125/181 (69.06%), Postives = 139/181 (76.80%), Query Frame = 3 Query: 6 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MATSTMALSSS F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 165 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 215
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.999e-61 Identity = 125/181 (69.06%), Postives = 139/181 (76.80%), Query Frame = 3 Query: 6 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA STMALSS SF GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 102.834 bits (255), Expect = 1.564e-21 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 165 CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 215
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.999e-61 Identity = 123/180 (68.33%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 6 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA ST ALSS F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176 HSP 2 Score: 102.834 bits (255), Expect = 1.564e-21 Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 164 CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 214
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.453e-61 Identity = 122/180 (67.78%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 6 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA ST ALSS F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176 HSP 2 Score: 99.7525 bits (247), Expect = 1.324e-20 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 164 CQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 214
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.692e-60 Identity = 122/179 (68.16%), Postives = 136/179 (75.98%), Query Frame = 3 Query: 6 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA +TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 175 HSP 2 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 46/51 (90.20%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 163 CQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 213
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.887e-60 Identity = 122/179 (68.16%), Postives = 135/179 (75.42%), Query Frame = 3 Query: 6 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 175 HSP 2 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 163 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 213
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.924e-60 Identity = 122/181 (67.40%), Postives = 139/181 (76.80%), Query Frame = 3 Query: 6 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA +TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 642 CQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK Sbjct: 165 CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.444e-59 Identity = 121/181 (66.85%), Postives = 137/181 (75.69%), Query Frame = 3 Query: 6 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177 HSP 2 Score: 99.7525 bits (247), Expect = 1.324e-20 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK+ Sbjct: 165 CQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 215
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.191e-59 Identity = 121/179 (67.60%), Postives = 133/179 (74.30%), Query Frame = 3 Query: 6 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 MA STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFSGEPPSYL P W T G + R ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG----LSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 175 HSP 2 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 1 Query: 496 QVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVK+ Sbjct: 164 QVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
BLAST of CF417130 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.444e-59 Identity = 122/181 (67.40%), Postives = 135/181 (74.59%), Query Frame = 3 Query: 6 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLDW*VPW---WTTVGTLLGFQLTQKPLPRTVELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLDGSR 518 M STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYL P W T G + + ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G ++G R Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAG----LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR 177 HSP 2 Score: 105.916 bits (263), Expect = 1.847e-22 Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 1 Query: 493 CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKK 645 CQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK+ Sbjct: 165 CQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 215 The following BLAST results are available for this feature:
BLAST of CF417130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417130 ID=CF417130; Name=CF417130; organism=Citrus sinensis; type=EST; length=646bpback to top |