CF417160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.644e-56 Identity = 122/226 (53.98%), Postives = 142/226 (62.83%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 E++WVKSDWKKDENTAGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKT V F + CGGGYMKLL + ++ P ++ I + +K L + KKEVPCETDQLTHVYT ++RPDATYSILIDN EKQ K + ++ ++ Y GYDDIPKEI DPDAKKP+DW Sbjct: 33 ENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTL-VFQFSVKHEQKLDCGGGYMKLLSSSTDQKKFGGDTPYSIMFGPDI-CGYSTKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWD-EKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW 255
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.172e-54 Identity = 121/226 (53.54%), Postives = 139/226 (61.50%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 + +WV S+WKKDEN AGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKT V F + CGGGY+KLL ++ P ++ I + +K L N KK+VPCETDQLTHVYTFI+RPDATYSILIDN EKQ K + ++ Q Y GYDDIPKEITDPDAKKP+DW Sbjct: 37 DKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTL-VFQFSVKHEQKLDCGGGYIKLLSGDVDQKKFGGDTPYSIMFGPDI-CGYSTKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAKKIKDPEAKKPEDWEDQE-YIPDPEDKKPEGYDDIPKEITDPDAKKPEDW 259
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.887e-53 Identity = 120/227 (52.86%), Postives = 140/227 (61.67%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN-*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ES+WVKSDWK+DEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISA FPEFSNK KT V F + CGGGYMKLL ++ S + + K + + T G+TN KK+VPCETDQLTHVYTFILRPDA+YSILIDN EKQ K + ++ + Y GYDDIPKEITDP+AKKP+DW Sbjct: 35 ESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTL-VFQFSVKHEQKLDCGGGYMKLL--SGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKP-EDWEDKEYIPDPEDKKPEGYDDIPKEITDPEAKKPEDW 257
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.924e-53 Identity = 119/226 (52.65%), Postives = 139/226 (61.50%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ES+WVKS+WKKDEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNK K V F + CGGGYMKLL ++ P ++ I + +K L + KKEVPCETDQLTHVYTFILRPDATYSILIDN EKQ K + ++ ++ + GYDDIP+EITDPDAKKP+DW Sbjct: 40 ESRWVKSEWKKDENMAGEWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKGKNL-VFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDI-CGYSTKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWD-EKEFIDDPEDKKPEGYDDIPEEITDPDAKKPEDW 262
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.432e-53 Identity = 121/233 (51.93%), Postives = 138/233 (59.23%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAP-------RKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 E +WVKSDWKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKT V F + CGGGYMKLL S++ V S++ P +K L G + KKEVPCETDQLTHVYTF+LRPDATYSILIDN EKQ K + ++ + Y GYDDIPKEI D DAKKP+DW Sbjct: 35 EKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTL-VFQFSVKHEQKLDCGGGYMKLL-----SDD---VDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPEDWD-DKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDW 257
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.097e-52 Identity = 115/227 (50.66%), Postives = 141/227 (62.11%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVV-IAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ES+WVKS+WKKDEN AGEWN+T+GKWNGD DKGIQTSEDYRFYAISAE+PEFSNKDKT V F + CGGGY+KLL ++ + + S + + + + +K L G+ + KK+VPC+TDQLTHVYTFI+RPDATYSILIDN EK K + ++ + Y GYDDIPKEI DPDAKKP+DW Sbjct: 38 ESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTL-VLQFSVKHEQKLDCGGGYVKLL--GGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPKKIKDPEAKKPEDWD-DKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW 260
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.213e-51 Identity = 116/226 (51.33%), Postives = 136/226 (60.18%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 E +WVKS+WKKDE+ AGEWNYT+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNKD T V F + CGGGYMKLL ++ P ++ I + +K + KK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ K + ++ + + GYDDIP EITDP+AKKP+DW Sbjct: 38 EKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTL-VFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDI-CGYSTKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAKKIKDPEAKKPEDWD-DKEFIPDPEDKKPEGYDDIPAEITDPEAKKPEDW 260
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 2.069e-51 Identity = 117/226 (51.77%), Postives = 137/226 (60.62%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 E++WVKS+WKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKT V F + CGGGYMKLL ++ P ++ I + +K L + KK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ K + ++ Q Y GYDDIPKEI D D+KKP+DW Sbjct: 35 ENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTL-VFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDI-CGYSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWDEQE-YISDPEDKKPDGYDDIPKEIPDTDSKKPEDW 257
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 2.702e-51 Identity = 113/226 (50.00%), Postives = 137/226 (60.62%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 ES+WVKS+WKKDEN AGEWN+T+GKWNGDP DKGIQTSEDYRFYAISAE+PEFSNKDKT V F + CGGGY+KLL ++ P ++ I + +K + + KK+VPCETDQL+HVYT I+ PDATY+ILIDN EKQ K + ++ + Y GYDDIPKEI DPDAKKP+DW Sbjct: 42 ESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTL-VLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDI-CGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWD-DKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW 264
BLAST of CF417160 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33 Identity = 86/226 (38.05%), Postives = 123/226 (54.42%), Query Frame = 1 Query: 1 ESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTXRVPVFC*A*TEAWTCGGGYMKLL*WRS*SEENLVVIPLTVSCLDQISVVIAPRKCMPFLPTMGQTN*SKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQXXXXXXXXXXXXXKDHQGS*RQET*RLG*QRIYXXXXXXXXXXGYDDIPKEITDPDAKKPDDW 678 +S+WV SDWK++E AG + +TAGKW GDP++KGIQT D + YAISA+ PEFSNK++T V + + CGG Y+KLL ++ P ++ I +K + GQ KK++ CETD+L H YTFILRPDA+YS+L+DN E++ + + ++ R Y G+D IP+EI D AK+P+DW Sbjct: 41 KSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTL-VVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGT-QTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWD-DREYIDDPNDVKPEGFDSIPREIPDRKAKEPEDW 263 The following BLAST results are available for this feature:
BLAST of CF417160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417160 ID=CF417160; Name=CF417160; organism=Citrus sinensis; type=EST; length=679bpback to top |