CF417178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417178 vs. ExPASy Swiss-Prot
Match: PCS1_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21 Identity = 78/220 (35.45%), Postives = 105/220 (47.73%), Query Frame = 3 Query: 6 FKDFIKCVAEFWRQEDAGVFSSXXXXXXXXXXXX------GTELFKHLNRWLASEICSCKSLVSLGFNENSVFPM---------------KPSLLDQTCRKETNLTLAKADGAKPMTLVSGKTRTNGIDQGIDMLLVPSSLPSQSGNLL------------HPSTAGILTLLVLALPQRTWAGIKQEKLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFL 566 F++FIK VAE R ED S T LFKH+ +L S CS + S + FP+ K S + C +ET + KA+ KP+ +V G +QG+D+L+ PS G L HP++ +LT+L+L+LP TWAGI EKLL++ + L SI+NLP LQ EVLHLRRQLH L Sbjct: 274 FEEFIKWVAEIRRGEDGSPSLSVEEKARLSVKEEILKQVQRTGLFKHVASFL-SHSCSGHTPTS---GDRDTFPVIAASVCCQGAEILGGKISSSAEYCCRETCMKCWKAEDDKPIRMVCGTVVNGNTEQGVDVLI-----PSSCGKLSCTCSSTTKSIRKHPASTDVLTVLLLSLPTSTWAGIADEKLLSEIHDLVSIENLPALLQEEVLHLRRQLHIL 484
BLAST of CF417178 vs. ExPASy Swiss-Prot
Match: PCS1_WHEAT (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum aestivum GN=PCS1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 228 DQTCRKETNLTLAKADGAKPMTLVSGKTRTNGIDQGIDMLLVPSSLPSQSGN-------LLHPSTAGILTLLVLALPQRTWAGIKQEKLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFL 566 D C +ET + +A+G T++SG + G +Q +D+LL SS + N + +PS+ +LT+L+L L TW GIK E + A+F L S DNLP L+ E+LHLRRQLH+L Sbjct: 366 DGFCCRETCIKCIEANGDGLKTVISGTVVSKGNEQAVDLLLPTSSSKTSLCNSNLKSKIVKYPSSTDVLTVLLLVLQPNTWLGIKDENVKAEFQSLVSTDNLPDLLKQEILHLRRQLHYL 485
BLAST of CF417178 vs. ExPASy Swiss-Prot
Match: PCS3_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 3 OS=Lotus japonicus GN=PCS3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16 Identity = 64/199 (32.16%), Postives = 95/199 (47.74%), Query Frame = 3 Query: 9 KDFIKCVAEFWRQEDAGVFSSXXXXXXXXXXXX------GTELFKHLNRWLASEICSCKSLVSLGFNENSVFPMKPS--------------LLDQTCRKETNLTLAKADGAKPMTLVSGKTRT-NGIDQGIDMLLVPSSLPSQSGNLL--HPSTAGILTLLVLALPQRTWAGIKQEKLLAQFNHLTSIDNLPTPLQLEV 536 ++FI +AE RQED + S T LFKH+ WL S+ C+++ L + + P + L C + ++ D +TLVSG + + +QG+D+L VP G+ + HPSTA +LT+L+LALP TW+GIK+EKL A+ L + +NLP LQ EV Sbjct: 275 REFITWIAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTTLFKHVTSWLDSQRSRCRTIAKL--QDRDMLPELAAGVCCQGACLLTGCCLPGGKCCSQIDVKHLNVDHKNIVTLVSGTVASGSSSEQGVDVL-VPLCQMGPEGHCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLCAEVTSLLTTENLPPLLQEEV 470
BLAST of CF417178 vs. ExPASy Swiss-Prot
Match: PCS1_ARATH (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana GN=PCS1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15 Identity = 62/205 (30.24%), Postives = 97/205 (47.32%), Query Frame = 3 Query: 6 FKDFIKCVAEFWRQED------AGVFSSXXXXXXXXXXXXGTELFKHLNRWLASEICSCKSLVSLGFNENSVFP-----------MKPSLLDQTCRKETNLTLAKADGAKPMTLVSGKTRTNGIDQGIDMLLVPSSLPSQSG-NLLHPSTAGILTLLVLALPQRTWAGIKQEKLLAQFNHLTSIDNLPTPLQLEVLHLRRQLHFL 566 F FI+ VAE ED A S TELFKH+N++L++ +G+ ++ + + S + C +ET + K T+V+G +G +Q +D+L+ + + G +P+ + T L+LALP +TW+GIK + L+ + L S+ +LPT LQ EVLHLRRQL L Sbjct: 274 FNQFIRWVAEIRITEDSNQNLSAEEKSRLKLKQLVLKEVHETELFKHINKFLST----------VGYEDSLTYAAAKACCQGAEILSGSPSKEFCCRETCVKCIKGPDDSEGTVVTGVVVRDGNEQKVDLLVPSTQTECECGPEATYPAGNDVFTALLLALPPQTWSGIKDQALMHEMKQLISMASLPTLLQEEVLHLRRQLQLL 468
BLAST of CF417178 vs. ExPASy Swiss-Prot
Match: PCS2_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus GN=PCS2 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 67/204 (32.84%), Postives = 96/204 (47.06%), Query Frame = 3 Query: 9 KDFIKCVAEFWRQEDAGVFSSXXXXXXXXXXXXGTE------LFKHLNRWLASEICSCKSLVSLGFNENSVFPMKPSLLDQTC-RKETNLTLAKADGAK-----------------PMTLVSGKTRT-NGIDQGIDMLLVPSSLPSQSGNLL--HPSTAGILTLLVLALPQRTWAGIKQEKLLAQFNHLTSIDNLPTPLQLEVL 539 ++FI +AE RQED + S E LFKH+ WL S+ C ++ +L + M P L + C + LT G K T VSG T + +QG+D+L VP G+ + HPSTA +LT+L+LALP TW+GIK+EKL A+ L + ++LP+ LQ EV+ Sbjct: 275 REFITWIAEVRRQEDGNLTLSEEEKGRLVIKAEILEKIRTAGLFKHVTSWLDSQRSRCSTIANLQDKD-----MLPELAARVCCQGACLLTGCCLSGGKCCCQIDVKHLNVDSKNLATTFVSGTFTTGSSSEQGVDVL-VPLCQRGPEGHYIAMHPSTADVLTVLLLALPLHTWSGIKEEKLRAEVTSLVTTEDLPSLLQEEVI 472 The following BLAST results are available for this feature:
BLAST of CF417178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417178 ID=CF417178; Name=CF417178; organism=Citrus sinensis; type=EST; length=670bpback to top |