CF417245 | Citrus Genome Database

Overview


Name	CF417245
Unique Name	CF417245
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	674

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CF417245_ssr455	microsatellite	CF417245_ssr455:455..466.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11902	contig	Csv1_Contig11902:507..1186.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	USDA-FP_115000-175 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_B01 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417245 ID=CF417245; Name=CF417245; organism=Citrus sinensis; type=EST; length=674bp
ATTTTGATGCAGAGGGAAATTTTGTTGAGTATGTCAACGAAAATGAAATC
AAGGATGCATGGCTTGATAGTCTTGAAGTTGATCAAAGATATGTTGGTAC
TGCAGTAATAGACAATAAAGTTATTGAGGCGCAGGAAGATAAAGATAATG
ATCATGAACTTTCTTCTGAAGAACTTGGAGTGATAAAGAGGCGTATTGCC
AACATTCTTGAGCCAGGAGAAACAGTTACACAAGCTCTGAGAAGGCTGAA
GGGAACTTCAAACAAGAAGGAAAAGATGTCGGCTGAGACAAAGCGCGTAT
TTGATCAGTTAACTGAGGATGCCATGAGGCTGATGGAGGAGAATGGAGAA
TATAATGTGTACCACGAGAACCGGGAGACTTTTGAGCGTGAGGCAGAAGG
ATATGAGAGGTTAGCTCAGTCAAAGGAAAAGGCTGATGCGTATGATATGT
TTGCTGATGATGATGAAGCTGCTACTGTGAAGCCATCATCTGATGAGCGT
AATACAGTTTTGGGTCCTAATTTAAATGCAGCCAGTCAATCATCATCAGA
TGCTCTGAGCACAGCTTCTGAATCTTTGCAAAATGACTATGTATATGACG
AGTCTTCTGGTTACTATTACAGCAGCAGTTTGGGCTATTACTATGACCCA
TCTACTGGACTTTACTGCTCGGCT