CF417298

Overview
NameCF417298
Unique NameCF417298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417298 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.389e-42
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query:  219 LINQMLTNAYDSEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGG 566
            +++ +  +   +E  G+ + LR +L  V+FNNITRL  GKRF++ EGV++EQG+EFK I+ NG+KLGA + +AE+ PWLRWMFPLEE  + KH  RRD+LT+ IMAEHT AR+K G
Sbjct:  151 MVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIMAEHTEARKKSG 266          

HSP 2 Score: 53.1434 bits (126), Expect = 3.389e-42
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 1
Query:  556 KRVGGAAKPHFVDALLXLQEEYELSDDTIIGLLW 657
            ++  G AK HFVDALL LQ++Y+LS+DTIIGLLW
Sbjct:  262 RKKSGGAKQHFVDALLTLQDKYDLSEDTIIGLLW 295          
BLAST of CF417298 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.273e-41
Identity = 62/102 (60.78%), Postives = 83/102 (81.37%), Query Frame = 3
Query:  255 EKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQK 560
            E + + ++LR YL AV+FNNITRL  GKRFM+ EGV++EQG+EFK I+ NG+KLGA +++AE+ PWLRWMFP +E+ + +H  RRD+LT+ IM EHTLARQK
Sbjct:  162 ENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLRWMFPADEKAFAEHGARRDRLTRAIMEEHTLARQK 263          

HSP 2 Score: 50.8322 bits (120), Expect = 1.273e-41
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 1
Query:  550 LVKRVGGAAKPHFVDALLXLQEEYELSDDTIIGLLW 657
            L ++    AK HFVDALL L+++Y+LS+DTIIGLLW
Sbjct:  259 LARQKSSGAKQHFVDALLTLKDQYDLSEDTIIGLLW 294          
BLAST of CF417298 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.154e-32
Identity = 53/102 (51.96%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  261 KGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGG 566
            +G+ M +R++LS V+FNNITRL  GKRFM+  G ++EQG EFK I+ NG+K+GA +++AE+  +LRW+ PL EE Y  HNERRD+LT  I+ EH  + ++ G
Sbjct:  168 EGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEFIWYLRWLCPLNEELYKTHNERRDRLTMKIIEEHAKSLKESG 269          

HSP 2 Score: 46.9802 bits (110), Expect = 1.154e-32
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  574 AKPHFVDALLXLQEEYELSDDTIIGLLW 657
            AK HFVDAL  L+++Y+LS+DT+IGLLW
Sbjct:  270 AKQHFVDALFTLKQQYDLSEDTVIGLLW 297          
The following BLAST results are available for this feature:
BLAST of CF417298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C98A2_SOYBN3.389e-4254.31Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH1.273e-4160.78Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI1.154e-3251.96Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-228 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417298 ID=CF417298; Name=CF417298; organism=Citrus sinensis; type=EST; length=665bp
ATGCCGTCATTTTTGTCATAATAATATTTCATTGGTGGCCAAATATCATT
TTCCTTTCTTATTGATATAGCTTTAACCATATAGTTAGTCAACTATTTTT
TCATCATTTAGATATAGTGTGGCACAAAATCTTTAAGAGATTAAATGATT
GGCACATCCAGCTTATCCAAATTCATTTTGCTTTTATATCAATCTTAAAG
TATTAATTCTTGGACCAATTAATTAACCAAATGCTTACAAATGCATATGA
CTCAGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAG
TATCATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGC
CCAGAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGG
AAATGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCAT
GGCTAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAAT
GAACGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGC
TCGTCAAAAGGGTGGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTG
CTCNATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCT
ACTTTGGGTGGGCCA
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