CF417347

Overview
NameCF417347
Unique NameCF417347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD2_BACSU (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Bacillus subtilis GN=yqjI PE=1 SV=4)

HSP 1 Score: 142.51 bits (358), Expect = 1.838e-45
Identity = 83/164 (50.61%), Postives = 102/164 (62.20%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAV-----DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
            LK V  L+ +EL  VF EWNKGEL S+LIEITA             LVD +LDK G KGTGKWT Q A DL V  P I  S+ ARF+S +KEERV+A+        G+ S   V     +K++LI+ VR+AL+ SKICSYAQG   ++A S E  WDLK GE+A
Sbjct:  203 LKQVLGLSADELHEVFAEWNKGELDSYLIEITADIFTKKDEETGKPLVDVILDKAGQKGTGKWTSQSALDLGVPLPIITESVFARFISAMKEERVKAS--------GLLSGPEVKPVTENKEELIEAVRKALFMSKICSYAQGFAQMKAASEEYNWDLKYGEIA 358          

HSP 2 Score: 61.6178 bits (148), Expect = 1.838e-45
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +IK+AYDR  +L NLL+D  F   +   Q A R+V+ LA+  G+  P  SS+L
Sbjct:  365 CIIRAAFLQKIKEAYDREPELDNLLLDSYFKNIVESYQGALRQVISLAVAQGVPVPSFSSAL 426          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNE7 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4)

HSP 1 Score: 124.79 bits (312), Expect = 3.384e-44
Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKG-ELLSFLIEITAXXXXXXXXXXXXY-LVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELAR 482
            LKSV  L   EL +VF  WNK  EL SFLIEITA              LV+ +LD  G KGTG+WTV+ A ++ VA PTI ++++AR LS +K ER  A+++       +    + D+Q  ID VR ALY SKICSYAQGM L+   S    + L LGELAR
Sbjct:  204 LKSVAGLNASELHDVFAAWNKTPELDSFLIEITADIFTKVDDLGTGQPLVELILDAAGQKGTGRWTVETALEIGVAIPTIIAAVNARILSSIKAERQAASEILSG---PITEPFSGDRQAFIDSVRDALYCSKICSYAQGMALLAKASQVYNYGLNLGELAR 362          

HSP 2 Score: 75.0998 bits (183), Expect = 3.384e-44
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL++IK+AYD +  LANLL+ PEF + I+DRQ AWRRV+ +A   GI  P  S+SL
Sbjct:  368 CIIRAGFLNKIKQAYDADPTLANLLLAPEFRQTILDRQLAWRRVIAIAAERGIPVPAFSASL 429          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNY3 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechocystis sp. (strain PCC 6803) GN=gnd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.795e-42
Identity = 72/161 (44.72%), Postives = 95/161 (59.01%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNK-GELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELAR 482
            LK+   L+NE+L  VF +WN+  EL SFLIEI+             +L+D +LD  G KGTG+WTV    +L V  PTI ++++AR +S LKEERV A+        G     + D +  I  VR ALY SK+CSYAQGM LI   S E G+D+ L E+AR
Sbjct:  214 LKNGLGLSNEQLHEVFGQWNQTDELNSFLIEISTDIFAKKDPETGGHLIDYILDAAGQKGTGRWTVMSGLELGVPIPTIYAAVNARVMSSLKEERVAASGQLS----GPSKTFSGDVEAWIPKVRDALYCSKMCSYAQGMALIAKASQEFGYDVNLPEIAR 370          

HSP 2 Score: 72.4034 bits (176), Expect = 1.795e-42
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FLD+IKKA+  N  L NLL+ PEF + I+DRQ  WR V+ LA   GI+ P  SSSL
Sbjct:  376 CIIRAGFLDKIKKAFKDNPQLPNLLLAPEFKQSILDRQGPWREVLMLANEMGIAVPAFSSSL 437          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAES (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gnd PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.049e-42
Identity = 71/159 (44.65%), Postives = 97/159 (61.01%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
            +K +  ++++E+   F EWN GEL S+LIEIT              LV+K+LD  G KGTGKWT   A +L V    I  S+ ARF+S +KEERV A+K  K    G +++   DK+  ++ +R+ALY SKICSYAQG   +R  S +  W+LKLGELA
Sbjct:  203 MKDLLGMSHKEISQTFKEWNAGELESYLIEITGDIFNKLDDDNEA-LVEKILDTAGQKGTGKWTSINALELGVPLTIITESVFARFISSIKEERVTASKSLK----GPKAHFEGDKKTFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGELA 356          

HSP 2 Score: 66.6254 bits (161), Expect = 3.049e-42
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +IK AYD N +L NLL+DP F   +++ Q A R VV  ++ +G+ TPG S+S+
Sbjct:  363 CIIRAQFLQKIKDAYDNNENLQNLLLDPYFKNIVMEYQDALREVVATSVYNGVPTPGFSASI 424          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAEQ (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gnd PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.049e-42
Identity = 71/159 (44.65%), Postives = 97/159 (61.01%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
            +K +  ++++E+   F EWN GEL S+LIEIT              LV+K+LD  G KGTGKWT   A +L V    I  S+ ARF+S +KEERV A+K  K    G +++   DK+  ++ +R+ALY SKICSYAQG   +R  S +  W+LKLGELA
Sbjct:  203 MKDLLGMSHKEISQTFKEWNAGELESYLIEITGDIFNKLDDDNEA-LVEKILDTAGQKGTGKWTSINALELGVPLTIITESVFARFISSIKEERVTASKSLK----GPKAHFEGDKKTFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGELA 356          

HSP 2 Score: 66.6254 bits (161), Expect = 3.049e-42
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +IK AYD N +L NLL+DP F   +++ Q A R VV  ++ +G+ TPG S+S+
Sbjct:  363 CIIRAQFLQKIKDAYDNNENLQNLLLDPYFKNIVMEYQDALREVVATSVYNGVPTPGFSASI 424          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SALTY (6-phosphogluconate dehydrogenase, decarboxylating OS=Salmonella typhimurium GN=gnd PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.492e-41
Identity = 78/165 (47.27%), Postives = 97/165 (58.79%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
            LK    L+NEEL N FTEWN GEL S+LI+IT             YLVD +LD+   KGTGKWT Q A DL      I  S+ AR++S LK +RV A+KV      G ++  A DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+A+    G
Sbjct:  204 LKGGLNLSNEELANTFTEWNNGELSSYLIDITKDIFTKKDEDGN-YLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKAQRVAASKVLS----GPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYHWDLNYGEIAKIFRAG 363          

HSP 2 Score: 56.9954 bits (136), Expect = 1.492e-41
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +I  AY  NAD+ANLL+ P F K   + Q A R VV  A+ +GI  P  S+++
Sbjct:  364 CIIRAQFLQKITDAYAENADIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPTFSAAV 425          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.944e-41
Identity = 77/160 (48.12%), Postives = 101/160 (63.12%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELAR 482
            LK V  L+N E+Q +F EWN+GEL S+LIEIT             Y+VDK+LDK G KGTGKWT + A DL V  P I  S+ AR++S  K+ERV+A+KV      G   N + DK+++I+ +R+ALY SKI SYAQG   +R  S E  WDL  G +A+
Sbjct:  205 LKRVLGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLS----GPAVNFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQ 360          

HSP 2 Score: 50.8322 bits (120), Expect = 1.944e-41
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL  I  A+D++++L NLL+D  F       Q A R VV LA+ +GI  P  +S++
Sbjct:  366 CIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGIPIPTFTSAI 427          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_ECOLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli (strain K12) GN=gnd PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.301e-41
Identity = 79/165 (47.88%), Postives = 97/165 (58.79%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
            LK    LTNEEL   FTEWN GEL S+LI+IT             YLVD +LD+   KGTGKWT Q A DL      I  S+ AR++S LK++RV A+KV      G Q+  A DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+A+    G
Sbjct:  204 LKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGN-YLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLS----GPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 363          

HSP 2 Score: 52.7582 bits (125), Expect = 4.301e-41
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +I  AY  N  +ANLL+ P F +   D Q A R VV  A+ +GI  P  S+++
Sbjct:  364 CIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAV 425          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAW (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MW2) GN=gnd PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
            +K +  +++E++   F +WN GEL S+LIEIT              LV+K+LD  G KGTGKWT   A +L +    I  S+ ARF+S +KEERV A+K       G +++   DK+  ++ +R+ALY SKICSYAQG   +R  S +  W+LKLG+LA
Sbjct:  203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356          

HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +IK AYD N  L NLL+DP F   + + Q A R VV   + +G+ TPG SSS+
Sbjct:  363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424          
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAS (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MSSA476) GN=gnd PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query:    3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
            +K +  +++E++   F +WN GEL S+LIEIT              LV+K+LD  G KGTGKWT   A +L +    I  S+ ARF+S +KEERV A+K       G +++   DK+  ++ +R+ALY SKICSYAQG   +R  S +  W+LKLG+LA
Sbjct:  203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356          

HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query:  500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
            CIIRA FL +IK AYD N  L NLL+DP F   + + Q A R VV   + +G+ TPG SSS+
Sbjct:  363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424          
The following BLAST results are available for this feature:
BLAST of CF417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
6PGD2_BACSU1.838e-4550.616-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNE73.384e-4446.916-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SYNY31.795e-4244.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAES3.049e-4244.656-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAEQ3.049e-4244.656-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SALTY1.492e-4147.276-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLA1.944e-4148.136-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ECOLI4.301e-4147.886-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAW9.513e-4142.146-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_STAAS9.513e-4142.146-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-277 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417347 ID=CF417347; Name=CF417347; organism=Citrus sinensis; type=EST; length=686bp
TACTGAAATCTGTTGGAAAGTTGACAAATGAGGAACTGCAAAATGTTTTC
ACAGAATGGAACAAGGGGGAGCTTCTCAGCTTCTTGATTGAAATCACTGC
AGATATTTTTGGAATAAAGGATGATAAGGGAGATGGTTACTTGGTTGACA
AGGTTTTGGACAAAACAGGTATGAAGGGTACTGGCAAATGGACTGTACAG
CAAGCTGCTGATCTATCAGTTGCAGCTCCCACTATTGCATCTTCTTTGGA
TGCAAGGTTCCTTAGTGGTTTAAAGGAAGAAAGAGTTGAAGCTGCCAAAG
TCTTTAAATCAGGTGGCTTTGGTGTTCAGTCTAACCAAGCTGTGGACAAG
CAGAAGTTGATTGATGATGTGAGGCAGGCTCTTTATGCATCCAAGATATG
TAGTTACGCACAGGGGATGAATCTTATTCGTGCAAAGAGTATTGAAAAAG
GATGGGACTTGAAGTTGGGGGAACTGGCTAGGGATTTGGNAAGGGGGGTT
GCATTATCCGTGCTGTGTTCCTTGACAGAATCAAGAAGGCATACGATAGG
AATGCTGATCTGGCAAACCTTCTTGTGGACCCTGAGTTTGCAAAGGAAAT
TGTTGATAGGCAGTCTGCCTGGCGAAGAGTTGTTTGCCTTGCTATCAACT
CGGGTATTAGCACACCTGGTATGTCATCCAGTCTTG
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