CF417414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417414 vs. ExPASy Swiss-Prot
Match: BPS1_ARATH (Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.262e-73 Identity = 132/198 (66.67%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 60 MSRPQDPHRPFFPFGNPFRMMSPKGSRLSPKLVSLLADFEETLAERLRKLMPKDKDDILNLSWMRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDISVNLLDICIAFSSVLTKVSQGHLLLQCVLHTLDSSSPTQFGRACSSLDNWREHISSKNPRVESCRSILXNLVASLDLPKVKNSAXGKVLMRAMYG 653 M+RPQDP R FFPFGNPF+ +S K S LS KL+ LL +FE LA + KL+PK+K DIL +SWM+ AMESLCETHN IK LIT+LELPVSDW++KW+DVYLDISV LLD+C AFSS LT+++QGHLLLQ LH L+++SP +A SSLD+W++HI SKNPR+E+CR+IL +LV +L+LPKVKNSA GKVLMRA+YG Sbjct: 1 MARPQDPPRGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLNLPKVKNSAKGKVLMRALYG 198
BLAST of CF417414 vs. ExPASy Swiss-Prot
Match: U496D_ORYSI (UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 8.503e-54 Identity = 112/202 (55.45%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 60 MSRPQDPHRPFFPFGNPFRMMSPKGSRLSPKLVSLLADFEETLAERLRKLMPKDKDDILNLSWMRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDISVNLLDICIAFSSVLTKVSQGHLLLQCVLHTLDSS----SPTQFGRACSSLDNWREHISSKNPRVESCRSILXNLVASLDLPKVKNSAXGKVLMRAMYG 653 MSR R FFP GNPFR+M P G+ LS KL LLA +E+ LA LRKL P+ D+L LSWMRLA++ L E H I +LIT+LELPVSDWD+KW+D+YL+ SV LLDICIA SS L+++ QG LLLQ LH L S S Q RA SL W E + + PR+ SC + L L +L L KVKNS GKVLMRA+YG Sbjct: 1 MSRAHGSPRSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCPRLVSCSATLQELAGNLSLMKVKNSVKGKVLMRALYG 202
BLAST of CF417414 vs. ExPASy Swiss-Prot
Match: U496D_ORYSJ (UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.474e-53 Identity = 112/202 (55.45%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 60 MSRPQDPHRPFFPFGNPFRMMSPKGSRLSPKLVSLLADFEETLAERLRKLMPKDKDDILNLSWMRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDISVNLLDICIAFSSVLTKVSQGHLLLQCVLHTLDSS----SPTQFGRACSSLDNWREHISSKNPRVESCRSILXNLVASLDLPKVKNSAXGKVLMRAMYG 653 MSR R FFP GNPFR+M P G+ LS KL LLA +E+ LA LRKL P+ D+L LSWMRLA++ L E H I +LIT+LELPVSDWD+KW+D+YL+ SV LLDICIA SS L+++ QG LLLQ LH L S S Q RA SL W E + + R+ SC + L L +L L KVKNSA GKVLMRA+YG Sbjct: 1 MSRAHGSPRSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELAGNLSLMKVKNSAKGKVLMRALYG 202 The following BLAST results are available for this feature:
BLAST of CF417414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417414 ID=CF417414; Name=CF417414; organism=Citrus sinensis; type=EST; length=727bpback to top |