CF417437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.458e-39 Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 L +++SGIHWWYK SHAAELTAG+YN +RDGY IA MLK+H ++NFTC E+R ++Q +A++ PE LV QVL+A W + VA ENALP YD YN IL NA+P + P L FTYLRLS L +G N++ F+ FV RMH Sbjct: 290 LAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSS---QAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 L +++SGIHWWYK SHAAELTAG+YN +RDGY IA MLK+H ++NFTC E+R +Q +A++ PE LV QVL+A W + VA ENALP YD YN IL NA+P + P L FTYLRLS L +G N++ F+ FV RMH Sbjct: 290 LAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSS---QAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 84/177 (47.46%), Postives = 106/177 (59.89%), Query Frame = 2 Query: 44 KLLKRGDTCFG------------LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 KL+K GD L +++SGIHWWY+ +HAAELTAG+YN +RDGY IA ML +H ++NFTC E+R +Q E EA + PE LV QVL+A W + VA ENAL YD YN IL NA+P N P L FTYLRLS L +G N+ F+ FV++MH Sbjct: 267 KLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSE---EAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKMH 440
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36 Identity = 80/154 (51.95%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 + ++SGIHWWY SHAAELTAGFYN + RDGY PIA ML +H LNFTC+E+R +Q EA + P+ LV QVL++ W I VA ENALP YD YN++L N +P LN P +S TYLRLS L NF F++FVK+MH Sbjct: 295 IAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQP---AEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMH 445
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 7.870e-36 Identity = 79/154 (51.30%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPL----NDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 L +++SGIHWWYK +HAAELTAG+YN ++RDGY PIA ML +H LNFTC+E+R +Q D A + P+ LV QVL+ W I VA ENALP YD YN+I+ NAKP N P + TYLRLS L NF F++FV +MH Sbjct: 293 LAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSD---AKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMH 443
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 84/177 (47.46%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 44 KLLKRGDTCF--------GLEVQL----SGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 KL+K GD G +VQL SGIHWWY +HAAELTAG+YN +RDGY IA ML +H ++NFTC E+R +Q EA + PE LV QVL+A W + +A ENAL YD YN IL NA+P N P L FTYLR+S L N+ F+ FV+RMH Sbjct: 267 KLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSS---EAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMH 440
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 75/154 (48.70%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 L +++SGIHWWYK +HAAELTAG+YN +RDGY PIA M+ +H +LNFTC+E+R +Q D A + P+ LV QVL+ W +I VA ENAL YD YN+I+ NA+P + P + TYLRLS L NF F++FV +MH Sbjct: 293 LAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSD---AQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFVVKMH 443
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 76/158 (48.10%), Postives = 99/158 (62.66%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHXGSS 538 L +++SGIHWWYK +HAAELTAG+YN +RDGY PIA M+ +H LNFTC+E+R +Q D A + P+ LV QVL+ W +I VA ENAL YD YN+I+ NA+P + P + TYLRLS L NF F++FV +MH S Sbjct: 293 LAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSD---AQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHADQS 447
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33 Identity = 74/154 (48.05%), Postives = 98/154 (63.64%), Query Frame = 2 Query: 77 LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 L +++SGIHWWYK +HAAELTAG+YN +RDGY PIA ++ +H LNFTC+E+R +Q D A + P+ LV QVL+ W +I VA ENAL YD YN+I+ NA+P + P + TYLRLS L NF F++FV +MH Sbjct: 293 LAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSD---AHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMH 443
BLAST of CF417437 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 44 KLLKRGDTCFG------------LEVQLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLN-DPDGR---HLSAFTYLRLSPVLTDGHNFIEFERFVKRMH 526 KL+ GD G L ++SGIHW Y SHAAELTAG+YN RDGY PIA ML KH LNFTC+E++ D + EAL+ P+ LV +VL+ AW I VA ENAL Y +GYN+IL NA+P +P+G+ + FTYLRLS + +NF F++ V++MH Sbjct: 272 KLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTD---NTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMH 445 The following BLAST results are available for this feature:
BLAST of CF417437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417437 ID=CF417437; Name=CF417437; organism=Citrus sinensis; type=EST; length=718bpback to top |