CF417452

Overview
NameCF417452
Unique NameCF417452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:501..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.653e-63
Identity = 106/204 (51.96%), Postives = 148/204 (72.55%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            R+Y L PV KY   +++GVS+     ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  + KI+E+YKGF+ +T LVDV            SKYP++KGINFD+PHVI+DA S+PG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+
Sbjct:  102 RIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSS 305          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.533e-62
Identity = 106/206 (51.46%), Postives = 147/206 (71.36%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A
Sbjct:   80 RVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLA 285          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.533e-62
Identity = 106/206 (51.46%), Postives = 147/206 (71.36%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A
Sbjct:   80 RVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLA 285          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.456e-61
Identity = 106/206 (51.46%), Postives = 145/206 (70.39%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P  DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A
Sbjct:  104 RLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLA 309          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.901e-61
Identity = 105/204 (51.47%), Postives = 146/204 (71.57%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            RLYSLAPV K+   +++GVSM   + ++ DKV+M  W+ LKD +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++ KI+E Y+GFQ +  +VDV            SKYP IKGINFD+PHVI+DA SYPG++HVGGDM+  +P+GDAI MKW+ H++ D +C+K L+NC++ALP +GKV++    LPE PDST
Sbjct:  104 RLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDST 307          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.483e-61
Identity = 105/206 (50.97%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P+ DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A
Sbjct:  104 RLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLA 309          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.243e-61
Identity = 105/206 (50.97%), Postives = 145/206 (70.39%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            RLY L PV K+   ++ GVS+ P   ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A
Sbjct:  104 RLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLA 309          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.224e-61
Identity = 103/203 (50.74%), Postives = 142/203 (69.95%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDS 619
            RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ L D +++G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF  +  +VDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP +GKV++    LPE PD+
Sbjct:  102 RLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDT 304          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.232e-60
Identity = 107/206 (51.94%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEA 628
            RLY LA VAKY V +++GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP+ DA+ MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A
Sbjct:  104 RLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLA 309          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.609e-60
Identity = 102/203 (50.25%), Postives = 142/203 (69.95%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDS 619
            RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF  +  +VDV            SKYP IKGINFD+PHV++DA SYPG+EHVGGDM+  +P+GDAI MKW+ H++ D +C+K L+ CY+ALP +GKV++    LPE PD+
Sbjct:  102 RLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDT 304          
The following BLAST results are available for this feature:
BLAST of CF417452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
OMT1_ARATH2.653e-6351.96Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT2_CHRAE8.533e-6251.46Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE8.533e-6251.46Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_POPKI1.456e-6151.46Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CATRO1.901e-6151.47Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPTM2.483e-6150.97Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_PRUDU3.243e-6150.97Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA7.224e-6150.74Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_MEDSA1.232e-6051.94Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT2_OCIBA1.609e-6050.25Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-382 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417452 ID=CF417452; Name=CF417452; organism=Citrus sinensis; type=EST; length=629bp
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCT
CATGTTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGG
AGATATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGA
TGCTTCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGT
TACAAAGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTT
GCCAGAAGTGCCTGACAGTACCGAGGCTT
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