CF417697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.213e-63 Identity = 114/139 (82.01%), Postives = 122/139 (87.77%), Query Frame = 2 Query: 278 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 VADISGLTPCK+SKQFAKR YAP+SAPALA+ A +EKTKRRFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASR++FRGF WP Sbjct: 66 VADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWP 204
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62 Identity = 129/210 (61.43%), Postives = 136/210 (64.76%), Query Frame = 2 Query: 68 IPTNLSKPLL-KPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 IPTNL KPL KP+ S S A SK + +ADI+GLTPCKESKQFAKR YA DSAPALAIKATMEKTK+RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLAS L+FRGFSWP Sbjct: 5 IPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWP 214
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62 Identity = 115/138 (83.33%), Postives = 119/138 (86.23%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 ADISGLTPCKESKQFAKR YAPDSAPALAIKATMEKTKRRFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLA++L+FRGFSWP Sbjct: 78 ADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWP 215
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.264e-59 Identity = 108/138 (78.26%), Postives = 120/138 (86.96%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 ADI+GLTPCKESK FAKR YAPDSAPALAI+AT++KTKRRF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+SGEKKPAM+EIIIDV LA+R++ RGF WP Sbjct: 77 ADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWP 214
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37 Identity = 80/143 (55.94%), Postives = 95/143 (66.43%), Query Frame = 2 Query: 278 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQR----HWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 +ADI+GLTPC ESK +AK Y DSAPA+A+KATME+TK RF NY K GLLCG+DGLPHLI H GE P FLY+AG+IG+VGR YLIA+ GE KP KEIIIDVPLA++L ++G WP Sbjct: 61 MADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWP 203
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 72/138 (52.17%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 A+++GL PCK+S F KR Y D+ PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP Sbjct: 20 AEVAGLVPCKDSAAFNKRMVNSVKKLQARLAKYDADTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAIKFMSSGFAWP 157
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.812e-37 Identity = 72/138 (52.17%), Postives = 88/138 (63.77%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 AD++GL PCK SK+F +R Y P++ P LA++ + KTK RF YG GLLCG+DGLPHLI G H GEF+ PGL FLYIAGWIGWVGR+Y+ S KP KEIIIDVP+A + G+ WP Sbjct: 22 ADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEIIIDVPVALSFISTGYIWP 159
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 71/138 (51.45%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 A+++GL PCK+S F KR Y ++ PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP Sbjct: 24 AEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAVKFMSSGFAWP 161
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_CYAPA (Photosystem I reaction center subunit III OS=Cyanophora paradoxa GN=psaF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35 Identity = 71/138 (51.45%), Postives = 89/138 (64.49%), Query Frame = 2 Query: 281 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 AD++GL PC +S F +R Y P SAPA A++ ++KT++RFD Y GLLCG+DGLPHLI G H GEF PGLLFLYIAG+IGW GRSYL A++ KEIIID+P+A + V +GF WP Sbjct: 25 ADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEIIIDIPVALQSVSKGFVWP 162
BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_GRATL (Photosystem I reaction center subunit III OS=Gracilaria tenuistipitata var. liui GN=psaF PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.837e-34 Identity = 70/137 (51.09%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 284 DISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694 + +GLT C+ES F KR Y ++ PA+A++ + KTK RF+ Y K G+LCG+DGLPHLI G H GEF+ PG+LFLYI GWIGWVGR YL IS KP KEII+DVPLA + GF+WP Sbjct: 27 ETAGLTKCQESPAFTKRLNNSVKKLETRLAKYDANTPPAIALQTQIIKTKIRFNKYAKSGILCGTDGLPHLITDGRWNHAGEFMIPGVLFLYITGWIGWVGRGYLRDISQTTKPTEKEIILDVPLALKYCLSGFTWP 163 The following BLAST results are available for this feature:
BLAST of CF417697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417697 ID=CF417697; Name=CF417697; organism=Citrus sinensis; type=EST; length=696bpback to top |