CF417742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RBP9X_DROME (Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster GN=RanBPM PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.930e-17 Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 2 Query: 257 VSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 +S + L V Y V D V+ P P +YYFE+ + G G + IG T++ F+M R PGW+ S GYHG Sbjct: 433 LSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHG 509 HSP 2 Score: 47.3654 bits (111), Expect = 1.930e-17 Identity = 18/46 (39.13%), Postives = 30/46 (65.22%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N+ + F+TKNG +G ++D+ L+ Sbjct: 521 GQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLY 566
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: YC5C_SCHPO (Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe GN=SPCC1259.12c PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 1.596e-16 Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 GEA+GP FTT D +G G+N+ ++ F+TKNG+ +G +K + L+ Sbjct: 167 GEAYGPEFTTGDIIGCGVNFINRTIFYTKNGAYLGVAFKKVSDVLY 212 HSP 2 Score: 53.1434 bits (126), Expect = 1.596e-16 Identity = 23/60 (38.33%), Postives = 34/60 (56.67%), Query Frame = 2 Query: 308 HDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 HD V+A+ P +YY+EI + G +G++ +GF +S + R PG A S GYHG Sbjct: 96 HDAASVKADHAIPSNTSIYYYEIQILSRGKEGKMGVGFCRKSMQTNRLPGCTAESWGYHG 155
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RBP10_DANRE (Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.533e-16 Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S + L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 53 YIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 132 HSP 2 Score: 45.0542 bits (105), Expect = 4.533e-16 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 144 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAFTDLPPNLY 189
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RBP10_MOUSE (Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.934e-16 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 93 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 172 HSP 2 Score: 44.669 bits (104), Expect = 9.934e-16 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 184 GQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLY 229
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RBP10_HUMAN (Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.944e-16 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 144 HSP 2 Score: 44.669 bits (104), Expect = 9.944e-16 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 156 GQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLY 201
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RBP10_BOVIN (Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.944e-16 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 144 HSP 2 Score: 44.669 bits (104), Expect = 9.944e-16 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 156 GQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLY 201
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RANB9_HUMAN (Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.288e-15 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 177 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 256 HSP 2 Score: 44.669 bits (104), Expect = 1.288e-15 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 268 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLY 313
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RANB9_MOUSE (Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.291e-15 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 102 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 181 HSP 2 Score: 44.669 bits (104), Expect = 1.291e-15 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 193 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLY 238
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RANB9_DANRE (Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.293e-15 Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 ++ +S + L V Y D V+A P P VYYFE+ + G G + IG +++ M R PGW+ +S GYHG Sbjct: 59 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHG 138 HSP 2 Score: 44.669 bits (104), Expect = 1.293e-15 Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+ Sbjct: 150 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLY 195
BLAST of CF417742 vs. ExPASy Swiss-Prot
Match: RANB9_XENLA (Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.310e-14 Identity = 25/80 (31.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 248 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHG 487 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHG Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHG 111 HSP 2 Score: 44.2838 bits (103), Expect = 2.310e-14 Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1 Query: 523 GEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLF 660 G+ +GPTFTT D +G +N F+TKNG +G + D+ L+ Sbjct: 123 GQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPNLY 168 The following BLAST results are available for this feature:
BLAST of CF417742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417742 ID=CF417742; Name=CF417742; organism=Citrus sinensis; type=EST; length=660bpback to top |