CF417745

Overview
NameCF417745
Unique NameCF417745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:183..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.504e-103
Identity = 180/238 (75.63%), Postives = 209/238 (87.82%), Query Frame = 1
Query:    4 NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 717
            N+DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSNFSV++ D
Sbjct:   24 NNDDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVTLD 256          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.007e-99
Identity = 176/240 (73.33%), Postives = 200/240 (83.33%), Query Frame = 1
Query:    1 VND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 717
            VND DD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+    +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG DG +CK DKSKI A+VSNFSVIS D
Sbjct:   25 VNDGDDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISID 260          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 354.369 bits (908), Expect = 3.588e-97
Identity = 169/235 (71.91%), Postives = 196/235 (83.40%), Query Frame = 1
Query:    7 DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 711
            D+D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S
Sbjct:   25 DEDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVS 255          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.157e-87
Identity = 160/244 (65.57%), Postives = 186/244 (76.23%), Query Frame = 1
Query:    1 VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 717
            V+ +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+D G CKFDKSKI A+V NFSV+S D
Sbjct:   21 VDAEDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSD-GKCKFDKSKIVASVQNFSVVSVD 261          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.251e-49
Identity = 103/221 (46.61%), Postives = 135/221 (61.09%), Query Frame = 1
Query:   70 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 708
            L  +  F  F+ KF+K Y+  EE+  RF +FK+NL + +   L+          GV KF+DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CGSCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I
Sbjct:   23 LEEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMI 241          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.878e-40
Identity = 91/242 (37.60%), Postives = 137/242 (56.61%), Query Frame = 1
Query:   19 MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 696
            MI  ++     Q E HL     +A+H+F  F   ++K Y   +  +YRF++FK NL     +  L+ +A++ + KFSDL+ +E   ++ GL  +   P++  +            AP    ++LP +FDWR +  +T VKDQGACGSCW+ +A G LE  + +    L++LSEQQL+DCD         S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +VS+
Sbjct:    5 MIFTILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKK--PSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GVCKIDNKKFALSVSS 234          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.878e-40
Identity = 95/221 (42.99%), Postives = 124/221 (56.11%), Query Frame = 1
Query:   67 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            L+  E H   +K +  K YA + E  +R ++F  N  + AK  QL     V    G+ K++D+   EF+    G N  LR     +   +  T        +P   DWR+HGAVTGVKDQG CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY G D  SC F+K+ I A  + F
Sbjct:   23 LIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGID-DSCHFNKATIGATDTGF 233          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.173e-39
Identity = 88/197 (44.67%), Postives = 123/197 (62.44%), Query Frame = 1
Query:  115 KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP--ILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 693
            K Y    E + RF++FK NL+   +   + D T   G+T+F+DLT  EFR  +L   +++    D+ K    +    D LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   D G C  DK+     V+
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVT 240          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39
Identity = 91/210 (43.33%), Postives = 115/210 (54.76%), Query Frame = 1
Query:   97 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            FK K+ + Y   EE  YR  +F+ N +      K+ +  + T    + KF D+T  EF     G   R   P      P   T    T+ DWR  GAVT VKDQG CGSCW+FS TG+LEG HFL TG L+SL+EQQLVDC     P+       GCNGG MN AF+YI    G++ E  YPY   D GSC+FD + +AA  S  + I+S
Sbjct:   23 FKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFY-PKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIKANNGIDTEAAYPYEARD-GSCRFDSNSVAATCSGHTNIAS 223          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39
Identity = 89/213 (41.78%), Postives = 123/213 (57.75%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            F+ +  KF++ Y++ E  + R+ +FK+N+          D   V G+  F+D+T  E+R+ +LG               +L   DL   P   DWR   AVT +KDQG CGSCWSFS TG+ EGAH L T +LVSLSEQ LVDC     PEE    + GC+GGLMN+AF+YI+K  G++ E  YPYT   G +C F+KS I A +  +  I++
Sbjct:   36 FTEWTLKFNRQYSSSEFSN-RYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCS---GPEE----NFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITA 240          
The following BLAST results are available for this feature:
BLAST of CF417745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP_PEA1.504e-10375.63Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH5.007e-9973.33Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH3.588e-9771.91Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE1.157e-8765.57Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI1.251e-4946.61Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATV_NPVAH6.878e-4037.60Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATL_SARPE6.878e-4042.99Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CPR1_ARATH1.173e-3944.67Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSP2_HOMAM5.823e-3943.33Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP2_DICDI5.823e-3941.78Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-675 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417745 ID=CF417745; Name=CF417745; organism=Citrus sinensis; type=EST; length=717bp
GTCAACGACGACGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGA
ACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCA
AGTCCAAATTCTCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGA
TTCCGCGTGTTCAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCT
GGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGT
CTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCA
GCTGACGCTCAAAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGA
CTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCG
CATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCG
CACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGT
GGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTG
GGTGCAATGGTGGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCT
GGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGG
TTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCTGTATCTAATTTCA
GTGTTATTTCCTCTGAT
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