CF417759

Overview
NameCF417759
Unique NameCF417759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5507 contig Csv1_Contig5507:217..888. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 8.773e-87
Identity = 99/119 (83.19%), Postives = 107/119 (89.92%), Query Frame = 2
Query:   89 PVLDKSEWVKGQAIR-QSTVSVRSLPSGPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            PVLD  E++KGQ +R  S   VR  PSG S+LT+RA SYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLL++APGLGQY+SGAILFEETLYQSTTDGKK
Sbjct:   11 PVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKK 129          

HSP 2 Score: 147.902 bits (372), Expect = 8.773e-87
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            ++MVDVL+EQ IVPGIKVDKG +PL GSNDESWCQGLDGLA R+AAYYQQGARFAKWRTVVSIPNGPSALAV+EAAWGL
Sbjct:  128 KKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGL 206          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.368e-84
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 2
Query:  101 KSEWVKGQAI---RQSTVSVRSLPSGPSALTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            KS+WVKGQ++   + S+VS       PSALT+RA S YADELVKTAKT+ASPG GI+AMDESNATCGKRLASIGLENTEANRQAYRTLLV+APGLGQYISGAILFEETLYQSTTDGKK
Sbjct:   15 KSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKK 132          

HSP 2 Score: 154.836 bits (390), Expect = 1.368e-84
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            ++MVDVLVEQNIVPGIKVDKGLVPL GS DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV+EAAWGL
Sbjct:  131 KKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGL 209          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.147e-83
Identity = 95/121 (78.51%), Postives = 108/121 (89.26%), Query Frame = 2
Query:   89 PVLDKSEWVKGQAI--RQSTVSVRSLPSGPSALTIRAGS-YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            PVLDKSEWVKGQ++  RQ + +   L +  ++LT+RA S YADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLV+APGLGQY+SGAILFEETLYQSTT+GKK
Sbjct:   11 PVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKK 131          

HSP 2 Score: 150.214 bits (378), Expect = 1.147e-83
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            ++MVDVLVEQNIVPGIKVDKGLVPL GSN+ESW QGLDGL+SRTAAYYQQGARFAKWRTVVSIPNGPSALAV+EAAWGL
Sbjct:  130 KKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGL 208          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.377e-80
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 2
Query:  179 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            LTIRAGSYADELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTE NRQA+RTLLVT P LG+YISGAILFEETLYQSTTDG+K
Sbjct:    2 LTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRK 89          

HSP 2 Score: 156.762 bits (395), Expect = 7.377e-80
Identity = 73/79 (92.41%), Postives = 79/79 (100.00%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            R++VDVL+EQNI+PGIKVDKGLVPLAGSNDESWCQGLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAV+EAAWGL
Sbjct:   88 RKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGL 166          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.331e-78
Identity = 89/115 (77.39%), Postives = 95/115 (82.61%), Query Frame = 2
Query:  101 KSEW-VKGQAIRQSTVSVRSLPSGPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            KSEW    QA     V+V        ++ +RAG+Y DELVKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST DGKK
Sbjct:   15 KSEWGATRQAAAPKPVTV--------SMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKK 121          

HSP 2 Score: 147.517 bits (371), Expect = 2.331e-78
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            +++VD+L EQ IVPGIKVDKGLVPLAGSN+ESWCQGLDGLASR AAYYQQGARFAKWRTVVSIPNGPS LAV+EAAWGL
Sbjct:  120 KKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGL 198          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.735e-76
Identity = 73/79 (92.41%), Postives = 79/79 (100.00%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            R++VDVLVEQNI+PGIKVDKGLVPLAGSN+ESWCQGLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAV+EAAWGL
Sbjct:   82 RKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGL 160          

HSP 2 Score: 150.984 bits (380), Expect = 4.735e-76
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 2
Query:  194 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            GSYADELVKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLVT P LG+YISGAILFEETLYQST DG+K
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRK 83          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.121e-70
Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 2
Query:  104 SEWVKGQAIRQSTVSVRSLPSGPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGK 439
            S W+  ++   ++ S  S P    +  IRAG+Y+DELVKTAK++ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISG+ILFEETLYQST DGK
Sbjct:   14 SPWIGQRSFAHTSAS--SSPPPRVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGK 123          

HSP 2 Score: 135.576 bits (340), Expect = 2.121e-70
Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            +  VD L + NIVPGIKVDKGL PLAGSN+ESWCQGLDGLASR+A YY+QGARFAKWRTVVS+P GPSALAV+EAAWGL
Sbjct:  123 KTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGL 201          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.397e-54
Identity = 70/83 (84.34%), Postives = 74/83 (89.16%), Query Frame = 2
Query:  194 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKK 442
            G Y +EL+KTA TVAS GRGILAMDESNATCGKRL SIG+ENTE NR+AYR LLVTAPGLGQYISGAILFEETLYQST  GKK
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKK 110          

HSP 2 Score: 92.8189 bits (229), Expect = 6.397e-54
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 3
Query:  438 RRMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGL 674
            ++ VDV+ EQNIVPGIKVDKGLVP   +   SWC GLDG  S  A YY+ GARFAKWR+VVSIP+GPS +  R  A+GL
Sbjct:  109 KKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIMLPR-LAYGL 184          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.209e-42
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 2
Query:  200 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGK 439
            Y DEL+KTAK +A+PGRGILA DES  T GKR A I +ENTE+NRQAYR LL T+PG    +SG ILFEETLYQ T+DGK
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGK 87          

HSP 2 Score: 82.8037 bits (203), Expect = 1.209e-42
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 3
Query:  447 VDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVREAA 665
            VD+L+E  ++PGIKVDKGLV LAG+N E+  QGLD L +R   YY+ GARFAKWR    I    PS L+++E A
Sbjct:   90 VDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDA 163          
BLAST of CF417759 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.223e-41
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 2
Query:  179 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGK 439
            +T   G YADEL+  A  +A+PG+ ILA DES  T GKR  SI +EN E+NR+A R LL T PG   Y+SG ILFEETLYQ T DGK
Sbjct:    1 MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGK 87          

HSP 2 Score: 87.8113 bits (216), Expect = 2.223e-41
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  447 VDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVREAAWGL 674
            VD + +  ++PGIKVDKG V LAG+N E+  QGLDGLA R A YY  GARFAKWR V+ I P  PS LA+ E A GL
Sbjct:   90 VDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGL 166          
The following BLAST results are available for this feature:
BLAST of CF417759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL8.773e-8783.19Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH1.368e-8480.51Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH1.147e-8378.51Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA7.377e-8092.05Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ2.331e-7877.39Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA4.735e-7692.41Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH2.121e-7068.75Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_CHLRE6.397e-5484.34Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH1.209e-4268.75Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL2.223e-4158.62Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-689 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417759 ID=CF417759; Name=CF417759; organism=Citrus sinensis; type=EST; length=674bp
AAGGCCTCTCGAGCTCAGAACCCACAGCAAGAAGAAGCAAAGAGGTAAAA
TGGCCTCGGCCTCTGCATCTTTACTCAAGTCATCATCCCCCGTTCTTGAC
AAGTCTGAGTGGGTTAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGT
CCGCAGCCTCCCCAGTGGCCCCTCTGCCCTCACCATCCGTGCTGGTTCCT
ATGCCGATGAGCTTGTCAAGACCGCGAAAACTGTTGCATCACCAGGACGT
GGAATTTTGGCCATGGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGC
CTCAATTGGGTTAGAGAACACTGAGGCTAACCGCCAGGCATACCGTACCC
TCCTTGTTACAGCCCCTGGTCTTGGACAATACATCTCTGGTGCCATCCTT
TTTGAGGAGACTCTCTACCAATCCACCACCGATGGCAAGAAGAATGGTTG
ATGTTCTTGTTGAGCAAAACATTGTCCCCGGTATCAAAGTCGACAAGGGT
TTGGTGCCCCTCGCTGGTTCCAATGACGAGTCATGGTGCCAGGGTCTTGA
TGGCCTAGCTTCTCGCACTGCTGCTTACTACCAACAGGGAGCTCGTTTTG
CCAAATGGCGTACTGTTGTGAGCATTCCCAATGGCCCATCTGCTTTGGCA
GTCAGGGAAGCCGCCTGGGGTCTT
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