CF417771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.540e-94 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 78 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 103.219 bits (256), Expect = 2.540e-94 Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG 77 HSP 3 Score: 88.9669 bits (219), Expect = 2.540e-94 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 211
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.310e-94 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 78 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 104.76 bits (260), Expect = 3.310e-94 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG 77 HSP 3 Score: 87.0409 bits (214), Expect = 3.310e-94 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 4.314e-94 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 77 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 104.375 bits (259), Expect = 4.314e-94 Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG 76 HSP 3 Score: 87.0409 bits (214), Expect = 4.314e-94 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 210
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.621e-93 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 76 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 170 HSP 2 Score: 102.064 bits (253), Expect = 1.621e-93 Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPG 75 HSP 3 Score: 87.4261 bits (215), Expect = 1.621e-93 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.621e-93 Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+L G+ Sbjct: 76 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGA 170 HSP 2 Score: 102.834 bits (255), Expect = 1.621e-93 Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPG 75 HSP 3 Score: 87.0409 bits (214), Expect = 1.621e-93 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.114e-93 Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 66 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 160 HSP 2 Score: 103.99 bits (258), Expect = 2.114e-93 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 3 Query: 99 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 65 HSP 3 Score: 90.1225 bits (222), Expect = 2.114e-93 Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAEL Sbjct: 158 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 199
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.587e-93 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 78 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 101.293 bits (251), Expect = 3.587e-93 Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG 77 HSP 3 Score: 87.0409 bits (214), Expect = 3.587e-93 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 4.675e-93 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 78 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 97.8265 bits (242), Expect = 4.675e-93 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 77 HSP 3 Score: 90.1225 bits (222), Expect = 4.675e-93 Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 211
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 7.940e-93 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 77 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 103.219 bits (256), Expect = 7.940e-93 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG 76 HSP 3 Score: 83.9593 bits (206), Expect = 7.940e-93 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAEL Sbjct: 169 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 210
BLAST of CF417771 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 3.888e-92 Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 1 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLDGS 567 DYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVL G+ Sbjct: 78 DYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 99.3673 bits (246), Expect = 3.888e-92 Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 93 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 281 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 77 HSP 3 Score: 88.5817 bits (218), Expect = 3.888e-92 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 560 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAEL 685 MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 211 The following BLAST results are available for this feature:
BLAST of CF417771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417771 ID=CF417771; Name=CF417771; organism=Citrus sinensis; type=EST; length=685bpback to top |