CF417775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_ORYSJ (Preprotein translocase subunit secY, chloroplastic OS=Oryza sativa subsp. japonica GN=SECY PE=2 SV=1) HSP 1 Score: 389.423 bits (999), Expect = 9.623e-108 Identity = 195/232 (84.05%), Postives = 211/232 (90.95%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K+EGEAGRKKVLQYTRYASVGFAIVQ IGQVL+LRPYVNDF GS FTT+IGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA+AFQDGNY+GL TII+SF+ LVLGIVYVQEAERKIP+NYASRY+SRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+ LKKAA++LNPGG+ Y+PTN+LLIAFFNYYYTFLQLDPDD+SEQLKR Sbjct: 229 KKEGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLLTIILSFLFLVLGIVYVQEAERKIPLNYASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNPGGALYIPTNVLLIAFFNYYYTFLQLDPDDLSEQLKR 460
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_MAIZE (Preprotein translocase subunit secY, chloroplastic OS=Zea mays GN=SECY PE=2 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 4.776e-107 Identity = 195/232 (84.05%), Postives = 211/232 (90.95%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 ++EGEAGRKKVLQYTRYASVGFAIVQ IGQVLYLRPYVNDF GS FTT+IGERISDLKLGNGTSLLIFTSIISYLPASFGRTVA+AFQDGNY+GL TII+SF+LLVLGIVYVQEAERKIP+NYASRY+SR+G LQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARF+G+ LKKAA+ALNPGG+ YLPTN+LLIAFFNYYYTFLQLDPDD+SEQLKR Sbjct: 226 RKEGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRTGELQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPTNVLLIAFFNYYYTFLQLDPDDLSEQLKR 457
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_ARATH (Preprotein translocase subunit secY, chloroplastic OS=Arabidopsis thaliana GN=SECY PE=1 SV=2) HSP 1 Score: 382.489 bits (981), Expect = 1.176e-105 Identity = 193/232 (83.19%), Postives = 205/232 (88.36%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K+EGEAGRKK+LQYTRYASVGFAIVQ IGQV YLRPYVNDF GS TTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRT AEA Q+GNY GL TI++SF+LLVLGIVYVQEAERKIP+NYASRYTS++GGLQ+SAYLPFKVNS+GVMPIIFSTSSLALP TLARFTGI+ALK A AL PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR Sbjct: 224 KKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 455
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_PEA (Preprotein translocase subunit secY, chloroplastic OS=Pisum sativum GN=SECY PE=2 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.897e-104 Identity = 189/232 (81.47%), Postives = 208/232 (89.66%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K+EGEAGRKK+LQYTRYASVGFAIVQ IGQVL+LRPY NDF GS FTTYIGE+I++LKLGNGTSLLIFT+IISYLPASFGRT ++AF D NY+GL TII+SF LLVLGIVYVQEAERKIPINYASR+TS+SGG+++SAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG+++LK AAVALNPGGSFYLP NILLIAFFNYYYTFLQLDPDDVSEQLKR Sbjct: 202 KKEGEAGRKKLLQYTRYASVGFAIVQAIGQVLFLRPYANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTSLLIFTNIISYLPASFGRTFSQAFSDANYVGLVTIIVSFFLLVLGIVYVQEAERKIPINYASRFTSKSGGIEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKR 433
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_SPIOL (Preprotein translocase subunit secY, chloroplastic OS=Spinacia oleracea GN=SECY PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 5.464e-103 Identity = 186/232 (80.17%), Postives = 206/232 (88.79%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K+EGEAGRKK+ QYT+YASVGFA+VQ IGQVL+LRPYVND+ GS FTTY+GERISDLKLGNGTSLLIFT+IISYLPASFGRTVAEA+Q+GNY GLA I++SF+ LV GIVYVQEAERKIP+NYASRY+ +SGGLQ+SAYLPFKVNS+GVMPIIFSTSSL+LP TLARFTG+ LKKAAVAL PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR Sbjct: 221 KKEGEAGRKKIKQYTQYASVGFALVQAIGQVLFLRPYVNDYSTEWVLSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTVAEAYQEGNYTGLAIIVVSFVSLVFGIVYVQEAERKIPMNYASRYSGKSGGLQKSAYLPFKVNSAGVMPIIFSTSSLSLPATLARFTGLDILKKAAVALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 452
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_SYNY3 (Preprotein translocase subunit secY OS=Synechocystis sp. (strain PCC 6803) GN=secY PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.260e-40 Identity = 93/243 (38.27%), Postives = 144/243 (59.26%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVL-YLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIIS--FILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFT----GIAALKKAAV----ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K EGEAGR+K+ QY+RY + G+ I+Q +G + LRPY N++ GS F +I E I++ +GNG SLLIF +I++ LP + G+T+ A G A +++ F+++++GIV+VQE R+IPI A R + +R++YLP ++N GVMPIIF+++ L LP +LA F G+ + V AL PG Y ++I FF+Y+Y L ++P+DVS+ LK+ Sbjct: 110 KNEGEAGRRKISQYSRYIAFGWCIIQGLGLTVGLLRPYANNYGPLFIFQTVLAITAGSMFVMWISELITERGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSITAVVLLMLVFLVMIVGIVFVQEGTRRIPIISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSLAGFATGNEGLGGFGEIFVQISNALRPGTWVYTVVYSVMIFFFSYFYASLIVNPEDVSKNLKK 352
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_PORPU (Preprotein translocase subunit secY OS=Porphyra purpurea GN=secY PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37 Identity = 82/232 (35.34%), Postives = 136/232 (58.62%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K EGE GR+K+ Q TRY ++G+A +Q ++++PYV ++ GS ++ E I++ +GNG SLLIF +I+S LP +F ++ +A I I+ F+L+++ ++VQE R+I I ++R +S L ++YLP K+N GVMPI+F+++S+ALP L + T L + P GS YL +LI FF+Y+YT + ++P+D++ LK+ Sbjct: 93 KEEGELGRQKITQITRYLALGWATLQSGAISIWVKPYVFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKNFTQSFFDANYSNTSIKFGLFIVIFLLMIIITIFVQEGTRRIKI-ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQVLYLFCPNGSLYLVLYSVLILFFSYFYTSIVMNPEDIATNLKK 323
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_SYNP6 (Preprotein translocase subunit secY OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 90/238 (37.82%), Postives = 139/238 (58.40%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K EGEAGR+K+ Q TRY S+G+A++Q I +++ Y GS F +I E I++ +GNG SLLIF +I++ LP S +T+ E Q G+ G+ ++I F+ ++GIV+VQE R+IP+ A R +RS+YLP ++N GVMPIIF+++ L LP +LA FT + + A L+P G Y ++LI F+Y+Y+ L L+P D+++ LK+ Sbjct: 114 KNEGEAGRRKIAQLTRYVSLGWALLQSIVIAVWVTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPRSLQQTL-ELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTSNEVVLRIANYLSPNGPTPWIYALFYLVLIVAFSYFYSSLILNPVDLAQNLKK 350
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_SYNE7 (Preprotein translocase subunit secY OS=Synechococcus elongatus (strain PCC 7942) GN=secY PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 90/238 (37.82%), Postives = 139/238 (58.40%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYI---GLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGS---FYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K EGEAGR+K+ Q TRY S+G+A++Q I +++ Y GS F +I E I++ +GNG SLLIF +I++ LP S +T+ E Q G+ G+ ++I F+ ++GIV+VQE R+IP+ A R +RS+YLP ++N GVMPIIF+++ L LP +LA FT + + A L+P G Y ++LI F+Y+Y+ L L+P D+++ LK+ Sbjct: 114 KNEGEAGRRKIAQLTRYVSLGWALLQSIVIAVWVTRYAVTPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPRSLQQTL-ELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVGNRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSLANFTSNEVVLRIANYLSPNGPTPWIYALFYLVLIVAFSYFYSSLILNPVDLAQNLKK 350
BLAST of CF417775 vs. ExPASy Swiss-Prot
Match: SECY_PORYE (Preprotein translocase subunit secY OS=Porphyra yezoensis GN=secY PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 80/232 (34.48%), Postives = 132/232 (56.90%), Query Frame = 3 Query: 3 KREGEAGRKKVLQYTRYASVGFAIVQXIGQVLYLRPYVNDFXXXXXXXXXXXXXXGSAFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYIGLATIIISFILLVLGIVYVQEAERKIPINYASRYTSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKR 698 K EGE GR+K+ Q TRY ++G+A +Q ++++PYV ++ GS ++ E I++ +GNG SLLIF +I+S LP +F ++ +A + I F+L+++ + VQE R+I I ++R +S L ++YLP K+N GVMPI+F+++S+ALP L + L + P GS YL LI FF+Y+YT + ++P+D++ LK+ Sbjct: 93 KEEGELGRQKITQITRYLALGWATLQSGAISIWVKPYVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLPKNFTQSFFDASYSNASLKFGLFIAIFLLMIIITICVQEGTRRIKI-ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQILYLFCPNGSLYLLLYCALILFFSYFYTSIVMNPEDIAINLKK 323 The following BLAST results are available for this feature:
BLAST of CF417775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417775 ID=CF417775; Name=CF417775; organism=Citrus sinensis; type=EST; length=698bpback to top |