CF417777

Overview
NameCF417777
Unique NameCF417777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10071 contig Csv1_Contig10071:40..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 2
Query:  386 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIM 652
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEM 273          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.829e-18
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 2
Query:  386 PVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIMQ 655
            P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+
Sbjct:  144 PIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMK 240          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.230e-13
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  425 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIMQN 658
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRS 129          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.673e-13
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  449 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIMQN 658
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRS 90          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  401 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIM 652
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAM 125          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 2
Query:  425 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIMQ 655
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI TQ SV  GS  AE M+
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMR 159          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2
Query:  467 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIM 652
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
BLAST of CF417777 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11
Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 2
Query:  389 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRXAAKSTPFSSDKLPEIFTQFSVKPGSVEAEIMQN 658
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++N
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKN 171          
The following BLAST results are available for this feature:
BLAST of CF417777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BURP3_ORYSJ4.354e-2766.29BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH2.829e-1853.61Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP2_ORYSJ1.230e-1348.72BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP6_ORYSJ4.673e-1352.86BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP1_ORYSJ8.813e-1245.24BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ1.963e-1151.28BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP7_ORYSJ3.349e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
BURP5_ORYSJ3.349e-1141.11BURP domain-containing protein 5 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-707 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417777 ID=CF417777; Name=CF417777; organism=Citrus sinensis; type=EST; length=659bp
ATTCTGGGTGTCTTTTAAAACATACTCAAAGCTATAATGGAGTTTCACTT
GTTGNCCATCCTTGCTTTCCTCAGTCTAGCACTGGTAGCAAGTCATGCTG
ACATTTCTCCTGAGCTTTACTGGAAAACTGTACTGCCAAATTCCCCGATG
CCAAAAGCTGTCAAAGATCTTCTACAGCCAGATGTGCTGGAAGACAAAAG
CACCTCTGTCAACGTAGGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAA
GGAAAGCCCGGTGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGG
TGTAAACACTGGAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAG
GAGGAGTATCCGTAAGTACAGGACACAAGGGAAAGCCAGTTTATGTTGGA
GTAAGCCCATTCAACTATGTATATGCTGCAAATGAGAACCAACTCCATGA
TGACCCGAATACAGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCA
TGAAGATGAACTTGCACTTCACTCAAACTTCAAATGGAGCAACTTTCTTA
TCTCGCCNAGCTGCCAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGA
GATCTTTACCCAGTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAA
TGCAGAACA
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