CF417809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.200e-41 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCXS 270 SALSAASSACDHIRDWV+GTPEGT+VSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTAEEL EEK LAYSC S Sbjct: 243 SALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCLS 332
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.492e-41 Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCXS 270 SALSAAS+ACDHIRDWVLGTP+GT+VSMGVYSDGSYNVP+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTAEEL+EEK LA+SC S Sbjct: 243 SALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAHSCLS 332
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.016e-40 Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCXS 270 SALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY+VP+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTAEEL EEK LAYSC S Sbjct: 243 SALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.327e-40 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 264 SALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY VPAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA+ELSEEK LAYSC Sbjct: 243 SALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAYSC 330
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.956e-40 Identity = 77/88 (87.50%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 264 SALSAASSACDHI DWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA EL EEK LAYSC Sbjct: 243 SALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAYSC 330
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.123e-39 Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 264 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T EL EEKALAYSC Sbjct: 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAYSC 330
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 3.268e-39 Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSC 264 SALSAASSACDHIRDWVLGTPEGT+VSMGVYSDGSY VP+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA+EL+EEK LAYSC Sbjct: 243 SALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAYSC 330
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.390e-28 Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+A DH+RDW LGTPEG WVSM V SDGSY +P GLIY FPV CRNG++ IVQGL I +FSR+K+D TA+EL EE+ Sbjct: 243 SAASAASAAIDHMRDWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEER 324
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.288e-27 Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAA++A DH+R W LGT EG WVSMG+YSDGSY + GLIYSFP TC+NG+WTIVQGL +++FSR K+ T +EL+EE+ Sbjct: 239 SAASAANAAVDHMRSWALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.682e-27 Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+A DH+RDW LGTPEG W SM V SDGSY + AGLIYSFPVTCR G++ IV GLS+D+FSR ++D TA EL+EE+ Sbjct: 237 SAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318 The following BLAST results are available for this feature:
BLAST of CF417809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417809 ID=CF417809; Name=CF417809; organism=Citrus sinensis; type=EST; length=537bpback to top |