CF417826

Overview
NameCF417826
Unique NameCF417826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10204 contig Csv1_Contig10204:52..608. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF417826 vs. ExPASy Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.118e-11
Identity = 35/132 (26.52%), Postives = 64/132 (48.48%), Query Frame = 1 
Query:  160 EETIGFGKPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXXVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRXTLPLEKNGEIPIP 555
            E+     KP A VT V   +++ +  + +  V                  ++S G+++ SG IPD G++ A     + +PV + +  + +   DI     I Y++ + L++D+PV G  T+PL + GEI +P
Sbjct:   14 EKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLP 145
The following BLAST results are available for this feature:
BLAST of CF417826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEA14_SOYBN9.118e-1126.52Desiccation protectant protein Lea14 homolog OS=Gl... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-756 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417826 ID=CF417826; Name=CF417826; organism=Citrus sinensis; type=EST; length=557bp
AAACTTCATCAACTGTCAGGTATGGCATCATCTGATAAGCCGGAAGTAGT
TGAAAGGGATGTTAAGGAGAAAGGGCACAAGGAGGATGACAAAGAAGAGG
GAAAAGGTGGATTTATCGAAAAAGTCAAGGATTTTATCCATGATATTGGT
GAAAAGATTGAGGAAACAATTGGATTTGGGAAGCCAACTGCTGATGTTAC
TGCAGTTCACATTCCTAAAATTAATCTTGAAAGGGCAGATATTGTTATTG
ACGTGCTCATTAAAAACCCGAATCCTATACCGATCCCTCTAATTGACATA
AACTACTTGGTTGAGAGTGATGGAAGGAAATTGGTTTCTGGATTGATCCC
AGATTCTGGAACTATTCATGCACATGGCGAGGAGACTGTCAAAATCCCTG
TTACTCTGATTTATGATGACATTAAAAATGCATATGATGATATCAAGCCT
GGGATGATTATTCCATATAAGATCAAGGTTGACCTGATTGTAGATGTGCC
GGTTTTTGGAAGGNTGACTCTTCCACTTGAGAAAAATGGAGAGATCCCCA
TTCCTTA
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