CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DYRK2_DICDI (Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.233e-46
Identity = 94/196 (47.96%), Postives = 130/196 (66.33%), Query Frame = 2
Query:    5 HDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ-NDSPATL 589
            +D  TG  V +KI++N K F +Q+L EIK+L+Y+  +DP     ++ L +YFY+R HL++  ELL  NLY+F K N   G    + +  ++    Q L +L+FL    +IH DLKPENIL+KS ++  +K+ID GSSCFE + + +Y+QSR YR+PEVILG  YDK IDIWSLGCIL E+ TG  LF  +D P  L
Sbjct:  623 YDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKVNHFQG----YNLNLVRRFGAQILTSLRFLSKRNIIHADLKPENILLKSPTKSGIKLIDFGSSCFENEQIFTYIQSRFYRSPEVILGTKYDKSIDIWSLGCILVEIFTGVPLFPGSDEPEQL 814          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43
Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A+D  T   V +KI++N K F  Q+ +EI++L ++ +HD  +  +++ ++DYF +R H  I  ELL  NLYE  K N   G  +        S+ +QCL+AL   +   +IHCD+KPEN+L+K   R  +KVID GSSCFE   + +Y+QSR YRAPEVILG  Y + ID+WSLGCILAEL +G+ LF  ++ +  LA +I
Sbjct:  293 AYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCITFELLSINLYELIKKNGFKGFSLQLVRKFAHSL-LQCLDAL---YKNDIIHCDMKPENVLLKQQGRSGIKVIDFGSSCFENQRIYTYIQSRFYRAPEVILGGKYGRAIDMWSLGCILAELLSGHALFPGENESDQLACII 489          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.018e-43
Identity = 95/200 (47.50%), Postives = 126/200 (63.00%), Query Frame = 2
Query:    8 DLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVN-KHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            DL T   V +K+IKN   F++Q + E+ +L+ +N K+DP DK HL+RLYD F ++ HL +V ELL  NLYE  K N+  G      +  ++S   Q L     L    +IHCDLKPENIL++  S   VKVID GS+C E   + +Y+QSR YR+PEVILGL Y+  ID+WSLGCILAEL  G  LF  +S    L R++
Sbjct:  149 DLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQFRG----LHLSLVRSFATQLLSCTSLLKQARIIHCDLKPENILLQDLSSPIVKVIDFGSACHERQTVYTYIQSRFYRSPEVILGLHYNCGIDMWSLGCILAELFLGLPLFPGNSEYNQLCRIV 344          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 92/199 (46.23%), Postives = 130/199 (65.33%), Query Frame = 2
Query:    8 DLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            D  TG  V +KII+N K F  Q+L E K+L+ + + DP D+Y +++  D+FY+R+HL +  ELL  NLYE  K N   G  +      ++SIT Q ++ L  L+   +IHCDLKPENIL+    + +VKVID GSSCFE + + +Y+QSR YR+PEVILG+ Y   ID+WSLGCI+AE+ TG  LF  ++    LA ++
Sbjct:  718 DYETGKLVALKIIRNKKRFHMQALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVV----IKSITRQLIQCLTLLNEKHVIHCDLKPENILLCHPFKSQVKVIDFGSSCFEGECVYTYIQSRFYRSPEVILGMGYGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIM 912          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PPK5_SCHPO (Serine/threonine-protein kinase ppk5 OS=Schizosaccharomyces pombe GN=ppk5 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.656e-41
Identity = 88/199 (44.22%), Postives = 126/199 (63.32%), Query Frame = 2
Query:    8 DLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            D   G  V +K+IKN + F  Q+L E+ +LK + + DP DK +++R   +F +R HL IV ELL +NL++  + N   G      +  ++S  +Q L+AL+ L G  +IHCDLKPEN+L+    +  +K+ID GSSCF  + + +Y+QSR YRAPE+ILGL Y K+IDIWS GCILAEL TG  LF   +    L  ++
Sbjct:  537 DHKRGQVVAIKVIKNRQKFHGQTLVEVGILKRLCEADPADKNNVIRYLSHFDFRGHLCIVTELLGSNLFDVIRENNYKG----LPLIVVKSFALQGLQALRLLQGQNIIHCDLKPENLLLSHPLKARIKLIDFGSSCFYNEKVYTYLQSRFYRAPEIILGLEYGKEIDIWSFGCILAELFTGVPLFPGGNETEQLGYIM 731          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.656e-41
Identity = 88/192 (45.83%), Postives = 122/192 (63.54%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            V +KII+N K F  Q+L E+K+L+ + K D  + Y+++ + D+FY+R H  I  ELL  NLYE  K N   G    F++  ++  T+  L+ LQ L    +IHCDLKPENI++    +  VKVID GSSC+E   + +Y+QSR YR+PEVILG  YD  ID+WSLGCI AEL TG  LF  ++    LA ++
Sbjct:  130 VALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQG----FSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVLYQKGQASVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYDVAIDMWSLGCITAELYTGYPLFPGENEVEQLACIM 317          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.163e-41
Identity = 89/203 (43.84%), Postives = 124/203 (61.08%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG--LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A+D  T  +V +KIIKN K FFDQ+  EI LL+  N HD  +KY+++ L  +F +R HL +V ELL  NLY+  K     G  +       Q +     + L FL    L +IHCDLKPEN+L+ +  R +++VID GSSC     +  Y+QSR YR+PEV+LG++YD KID+WSLGCIL E+ TG  LF   S    + +++
Sbjct:  384 AYDTVTKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTNFRGVSLNLARKFAQQLG----KTLLFLSSPELSIIHCDLKPENVLLVNAKRSQIRVIDFGSSCQTGHRIYQYIQSRFYRSPEVLLGIAYDTKIDMWSLGCILVEMHTGEPLFAGSSEVDQMMKIV 582          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DYRK2_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Mus musculus GN=Dyrk2 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.824e-41
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A+D      V +K+++N K F  Q+ +EI++L+++ K D  +  +++ + + F +R H+ +  ELL  NLYE  K N+  G    F++P ++      L+ L  LH   +IHCDLKPENIL+K   R  +KVID GSSC+E   + +Y+QSR YRAPEVILG  Y   ID+WSLGCILAEL TG  L   +     LA +I
Sbjct:  237 AYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSSIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 433          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: YAK1_YEAST (Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae GN=YAK1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.818e-41
Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVN-KHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            + VK++K+  ++  QS+ E K+L+ +N K DP +K+H LR+YD F ++ HL +V ELL  NLYE  K N+  G     ++  +++ T Q L++L  L    LIHCDLKPENIL+ +  + E+K+ID GSSC E   + +Y+QSR YRAPE+ILG+ Y   ID+WSLGCI+AEL  G  +F   S    L R+I
Sbjct:  395 LAVKVVKSRTEYLTQSITEAKILELLNQKIDPTNKHHFLRMYDSFVHKNHLCLVFELLSNNLYELLKQNKFHG----LSIQLIRTFTTQILDSLCVLKESKLIHCDLKPENILLCAPDKPELKIIDFGSSCEEARTVYTYIQSRFYRAPEIILGIPYSTSIDMWSLGCIVAELFLGIPIFPGASEYNQLTRII 583          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 4.818e-41
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A+D      V +K+++N K F  Q+ +EI++L+++ K D  +  +++ + + F +R H+ +  ELL  NLYE  K N+  G    F++P ++      L+ L  LH   +IHCDLKPENIL+K   R  +KVID GSSC+E   + +Y+QSR YRAPEVILG  Y   ID+WSLGCILAEL TG  L   +     LA +I
Sbjct:  239 AYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 435          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DYRK2_DICDI2.233e-4647.96Probable serine/threonine-protein kinase dyrk2 OS=... [more]
DYRK3_DROME1.355e-4344.78Putative dual specificity tyrosine-phosphorylation... [more]
PPK15_SCHPO3.018e-4347.50Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
POM1_SCHPO5.147e-4346.23Dual specificity protein kinase pom1 OS=Schizosacc... [more]
PPK5_SCHPO1.656e-4144.22Serine/threonine-protein kinase ppk5 OS=Schizosacc... [more]
DYRK4_HUMAN1.656e-4145.83Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK1_CAEBR2.163e-4143.84Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_MOUSE2.824e-4142.79Dual specificity tyrosine-phosphorylation-regulate... [more]
YAK1_YEAST4.818e-4145.60Dual specificity protein kinase YAK1 OS=Saccharomy... [more]
DYRK2_HUMAN4.818e-4142.79Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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