CF417837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.351e-53 Identity = 109/147 (74.15%), Postives = 115/147 (78.23%), Query Frame = 2 Query: 86 MFTRLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 M RLFGKPKQE NAL TLD AK+YS+AKNKRAAIQCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTETVDALR+GAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEAL+TP+ Sbjct: 1 MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPM 147
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52 Identity = 108/143 (75.52%), Postives = 113/143 (79.02%), Query Frame = 2 Query: 95 RLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTP 523 RLFGKPKQET+ L TLD AK++S+AKNKRAAIQCLKRKRLYEQQ+EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAS MKAMQKATNIDDVDKTMDEINEQTENMKQIQEALS P Sbjct: 5 RLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAP 147
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: SNF7_KLULA (Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis GN=SNF7 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 224 AKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 AK ++ NK A LK+K+LYE Q+++L + + Q+ +E A ET+ A++ GAS MK + K ++D VD TMDEI EQ E ++I EA+S P+ Sbjct: 48 AKKSLQSGNKNNAKTYLKKKKLYESQLDKLQSQIDSLDQQLYSIENANLNLETLKAMKQGASAMKNIHKGLDLDKVDDTMDEIREQVELNQEISEAISKPL 148
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: SNF7_CANGA (Vacuolar-sorting protein SNF7 OS=Candida glabrata GN=SNF7 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 224 AKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 A+ + NK A LK+K++YE Q+ +L + + Q+ +E A ET+ A++ GA MK++ +ID VD+TMDEI EQ E ++I +A+S P+ Sbjct: 49 ARKFLTRGNKTMAKNALKKKKVYEGQLVKLESQMDSLEQQLFSIESANLNLETMRAMKQGAKAMKSIHSGLDIDRVDETMDEIREQVELGEEISDAISRPL 149
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: SNF7_CANAL (Vacuolar-sorting protein SNF7 OS=Candida albicans GN=SNF7 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 224 AKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 A+ Y +K A LKRK+ YE + ++ N + Q+I +EGA ET+ A++ GA MK + ++D V+ TMDEI EQ E +I EA+S P+ Sbjct: 49 ARKYVSSKQTTLAKSALKRKKGYESNLLKVENQIETLETQLISIEGANLNLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELADEISEAISRPV 149
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: SNF7_ASHGO (Vacuolar-sorting protein SNF7 OS=Ashbya gossypii GN=SNF7 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 224 AKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 A+ + NK A LKRK+++E Q+ ++ + Q+ +E A ET+ A++ GAS MK + + +++ VD+TMDEI EQ E ++I EA+S P+ Sbjct: 50 ARHFLSKGNKNMAKAALKRKKVFESQLLKIDKQVDSLEQQLYSIENANLNLETMKAMKQGASAMKHIHEGLDVERVDETMDEIREQVELGEEISEAISRPL 150
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: CHM4B_DANRE (Charged multivesicular body protein 4b OS=Danio rerio GN=chmp4b PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 245 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I EQ E ++I +A+S P+ Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQDIIEQQELAQEISDAISKPV 151
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: SNF7_SCHPO (Vacuolar-sorting protein snf7 OS=Schizosaccharomyces pombe GN=snf7 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12 Identity = 32/93 (34.41%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 248 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 NKR A+ LKRK+++E ++ ++ + I Q+ ++ A ET+ A+R GA MK++Q+ + D VD+ MD+I +Q ++I +STP+ Sbjct: 56 NKRLALTALKRKKMHENELVKIEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTISEEISTMISTPV 148
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: CHM4C_DANRE (Charged multivesicular body protein 4c OS=Danio rerio GN=chmp4c PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 245 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 526 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MK + +ID VD M +I EQ E ++I +A+S P+ Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDIDKVDDLMQDITEQQELAQEISDAISRPV 151
BLAST of CF417837 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 2 Query: 236 SKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALS 517 SK K+ A++ LK+KR+YEQQ + L + ++ K T TVDA++ GA MK K ID ++ D++ + EN +IQEALS Sbjct: 57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALS 150 The following BLAST results are available for this feature:
BLAST of CF417837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417837 ID=CF417837; Name=CF417837; organism=Citrus sinensis; type=EST; length=639bpback to top |