CF417859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417859 vs. ExPASy Swiss-Prot
Match: SIZ1_ARATH (E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.460e-47 Identity = 92/159 (57.86%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 2 INCSTPMNG-YTLAPDTSXGSASLVPGCTVGAAADMSDALVDNPLAFDREDPSLQIFLPTRPSDTSVQTELRDQADVANGIRTEDWISLRLGDGVTGGQNELAAANGLNSKQPVHSRESAMDSLADTASLLLGMNEGRSEKASRQRSDSPFSFPRQKRS 475 +NCS +NG YT+AP+TS S +VPG T ++ +D LVDNPLAF R+DPSLQIFLPT+P D S Q+ ++QAD++NG+R+EDWISLRLGD +G + A NG+NS + +RE +MD+ +TASLLLGMN+ R +KA +QRSD+PFSFPRQKRS Sbjct: 704 LNCSPEINGGYTMAPETSMASVPVVPGST--GRSEANDGLVDNPLAFGRDDPSLQIFLPTKP-DASAQSGFKNQADMSNGLRSEDWISLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQDKAKKQRSDNPFSFPRQKRS 859
BLAST of CF417859 vs. ExPASy Swiss-Prot
Match: SIZ1_ORYSJ (E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.706e-29 Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 2 Query: 23 NGYTLAPDTSXGSASLVPGCTVGAAA-DMSDALVDNPLAFDREDPSLQIFLPTRPSDTSVQTELRDQADVANGIRTEDWISLRLGDGVTGGQNELAAANGLNSKQPVHSRESAMDSLADTASLLLGMNEGRSEKA--SRQRSDSPFSFPRQKRSVRPRLYLSIDSDSE 517 N Y+L + AS+ P +V + +M +LVDNPLA +DPSLQIFLP++PS +Q EL ++A+ NG++++DWISL L G GG NE A +NS+ + S E+ ++ L D AS L N R A + +R ++ FS PRQ RSVRPRL LSID+DSE Sbjct: 710 NDYSLDCNVGVEEASVTPALSVCRNSNEMHGSLVDNPLALVGDDPSLQIFLPSQPSSVPLQEELSERANAPNGVQSDDWISLTLAAG--GGGNEEPAPADVNSQPQIPSTETGIEPLTDAASAFLSTNIERRSGADLNPRRIENIFSHPRQPRSVRPRLCLSIDTDSE 875 The following BLAST results are available for this feature:
BLAST of CF417859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417859 ID=CF417859; Name=CF417859; organism=Citrus sinensis; type=EST; length=691bpback to top |